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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P21817.3
Original Database ID NP_000531.2 RY
Organism Homo sapiens
Annotation ryr1_human recname: full=ryanodine
receptor 1; short=ryr-1; short=ryr1;
altname: full=skeletal muscle
calcium release channel; altname:
full=skeletal ...
Sequence Length 5038

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region215-570
Protein Length5038
Template PDB Code1n4kA
Template Region236-602
Sequence Identity20%
E-Value 0
GA3410.14
MPQS-0.21
z-DOPE1.37
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO350.0687244
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1n4kcrystal structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with ip3 ; PFAM: PF01365 PF02815 ; SCOP: 79992 79993
DBALI1n4kA 
CATH2.80.10.50 Domain: 1n4kA01 Trefoil (Acidic Fibroblast Growth Factor, subunit A) (100%)
CATH1.25.10.30 Domain: 1n4kA02 IP3 receptor type 1 binding core, domain 2 (100%)
JenaImageLibrary1n4k 
Target Sequence
UniProtKBQ9P1U4RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9P1U4 
PFAMQ9P1U4 
ProdomQ9P1U4 
UniProtKBQ9NPK1RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9NPK1 
PFAMQ9NPK1 
ProdomQ9NPK1 
UniProtKBQ16368RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16368 
PFAMQ16368 
ProdomQ16368 
UniProtKBQ16314RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16314 
PFAMQ16314 
ProdomQ16314 
UniProtKBP21817RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProP21817 
PFAMP21817 
ProdomP21817 
UniProtKBP21817.3RYR1_HUMAN RecName: Full=Ryanodine receptor 1; Short=RYR-1; Short=RyR1; AltName: Full=Skeletal muscle calcium release channel; AltName: Full=Skeletal muscle-type ryanodine receptor
InterProP21817.3 
PFAMP21817.3 
ProdomP21817.3 
UniProtKBQ16314RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16314 
PFAMQ16314 
ProdomQ16314 
UniProtKBP21817RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProP21817 
PFAMP21817 
ProdomP21817 
UniProtKBQ16368RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16368 
PFAMQ16368 
ProdomQ16368 
UniProtKBQ9NPK1RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9NPK1 
PFAMQ9NPK1 
ProdomQ9NPK1 
UniProtKBQ9P1U4RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9P1U4 
PFAMQ9P1U4 
ProdomQ9P1U4 
RefSeqNP_000531.2 ryanodine receptor 1 isoform 1 [Homo sapiens]
GenPept113204615 ryanodine receptor 1 isoform 1 [Homo sapiens]
GenPept108935904RYR1_HUMAN RecName: Full=Ryanodine receptor 1; Short=RYR-1; Short=RyR1; AltName: Full=Skeletal muscle calcium release channel; AltName: Full=Skeletal muscle ryanodine receptor; AltName: Full=Skeletal
ENSEMBLENSP00000352608