University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P21817.3
Original Database ID NP_000531.2 RY
Organism Homo sapiens
Annotation ryr1_human recname: full=ryanodine
receptor 1; short=ryr-1; short=ryr1;
altname: full=skeletal muscle
calcium release channel; altname:
full=skeletal ...
Sequence Length 5038

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region9-375
Protein Length5038
Template PDB Code4jkqA
Template Region10-399
Sequence Identity70%
E-Value5.9e-11
GA3411
MPQS0.779546
z-DOPE0.14
TSVMod MethodMSALL
TSVMod RMSD2.797
TSVMod NO350.951
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4jkq
DBALI4jkqA 
JenaImageLibrary4jkq 
Target Sequence
UniProtKBQ9P1U4RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9P1U4 
PFAMQ9P1U4 
ProdomQ9P1U4 
UniProtKBQ9NPK1RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9NPK1 
PFAMQ9NPK1 
ProdomQ9NPK1 
UniProtKBQ16368RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16368 
PFAMQ16368 
ProdomQ16368 
UniProtKBQ16314RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16314 
PFAMQ16314 
ProdomQ16314 
UniProtKBP21817RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProP21817 
PFAMP21817 
ProdomP21817 
UniProtKBP21817.3RYR1_HUMAN RecName: Full=Ryanodine receptor 1; Short=RYR-1; Short=RyR1; AltName: Full=Skeletal muscle calcium release channel; AltName: Full=Skeletal muscle-type ryanodine receptor
InterProP21817.3 
PFAMP21817.3 
ProdomP21817.3 
UniProtKBQ16314RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16314 
PFAMQ16314 
ProdomQ16314 
UniProtKBP21817RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProP21817 
PFAMP21817 
ProdomP21817 
UniProtKBQ16368RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ16368 
PFAMQ16368 
ProdomQ16368 
UniProtKBQ9NPK1RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9NPK1 
PFAMQ9NPK1 
ProdomQ9NPK1 
UniProtKBQ9P1U4RecName: Full=Ryanodine receptor 1;Short=RYR-1;Short=RyR1;AltName: Full=Skeletal muscle calcium release channel;AltName: Full=Skeletal muscle ryanodine receptor;AltName: Full=Skeletal muscle-type ryan
InterProQ9P1U4 
PFAMQ9P1U4 
ProdomQ9P1U4 
RefSeqNP_000531.2 ryanodine receptor 1 isoform 1 [Homo sapiens]
GenPept113204615 ryanodine receptor 1 isoform 1 [Homo sapiens]
GenPept108935904RYR1_HUMAN RecName: Full=Ryanodine receptor 1; Short=RYR-1; Short=RyR1; AltName: Full=Skeletal muscle calcium release channel; AltName: Full=Skeletal muscle ryanodine receptor; AltName: Full=Skeletal
ENSEMBLENSP00000352608