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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1000056
Original Database ID P68254
Organism Escherichia coli
Annotation 2dri chain , d-ribose-binding
protein complexed with beta-d-ribose
Sequence Length 271

Dataset Information:

The newest dataset for this sequence was created on 2015-06-22. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-271
Protein Length271
Template PDB Code2driA
Template Region1-271
Sequence Identity100%
E-Value0
GA3411
MPQS2.2819
z-DOPE-1.93
TSVMod MethodMTALL
TSVMod RMSD0.236
TSVMod NO350.993
DatasetMW-update_D4922
ModPipe VersionSVN.r1597
Model Date2015-06-22

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2driprobing protein-protein interactions: the ribose binding protein in bacterial transport and chemotaxis ; PFAM: PF00532 ; SCOP: 35637
DBALI2driA 
CATH3.40.50.2300 Domain: 2driA01 Rossmann fold (100%)
CATH3.40.50.2300 Domain: 2driA02 Rossmann fold (100%)
JenaImageLibrary2dri 
Target Sequence
PDB1URPDChain D, D-Ribose-Binding Protein From Escherichia Coli
PDB1URPD Chain D, D-Ribose-Binding Protein From Escherichia Coli
PDB1URPAChain A, D-Ribose-Binding Protein From Escherichia Coli
PDB1URPBChain B, D-Ribose-Binding Protein From Escherichia Coli
PDB1URPCChain C, D-Ribose-Binding Protein From Escherichia Coli
PDB2DRIA Chain A, Probing Protein-Protein Interactions: The Ribose Binding Protein In Bacterial Transport And Chemotaxis
PDB2DRIAChain A, Probing Protein-Protein Interactions: The Ribose Binding Protein In Bacterial Transport And Chemotaxis
GenPept3318869C Chain C, D-Ribose-Binding Protein From Escherichia Coli
GenPept3318868B Chain B, D-Ribose-Binding Protein From Escherichia Coli
GenPept3318867A Chain A, D-Ribose-Binding Protein From Escherichia Coli
GenPept10000562DRI Chain , D-Ribose-Binding Protein Complexed With Beta-D-Ribose
GenPept157834794A Chain A, Probing Protein-Protein Interactions: The Ribose Binding Protein In Bacterial Transport And Chemotaxis
GenPept3318870D Chain D, D-Ribose-Binding Protein From Escherichia Coli