University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O15056
Original Database ID EN ENSP00000347792
Organism Homo sapiens
Annotation synaptojanin 2 (ec 3.1.3.36) (synaptic
inositol-1,4,5-trisphosphate 5-de
phosp hatase 2) (fragment)
Sequence Length 1443

Dataset Information:

The newest dataset for this sequence was created on 2006-10-13. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region456-831
Protein Length1443
Template PDB Code1i9zA
Template Region537-868
Sequence Identity40%
E-Value 0
GA3411
MPQS0.63
z-DOPE-0.79
DatasetH.sapiens
ModPipe VersionModPipe2.0
Model Date2006-10-13

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1i9zcrystal structure of inositol polyphosphate 5-phosphatase domain (ipp5c) of spsynaptojanin in complex with inositol (1,4)-bisphosphate and calcium ion ; PFAM: PF03372 ; SCOP: 62102
DBALI1i9zA 
CATH3.60.10.10 Domain: 1i9zA00 Deoxyribonuclease I; Chain A (96%)
JenaImageLibrary1i9z 
Target Sequence
UniProtKBO15056Synaptojanin 2 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5-DE phosphatase 2) (Fragment)
InterProO15056 
PFAMO15056 
ProdomO15056 
GenPept10720297SYJ2_HUMAN SYNAPTOJANIN 2 (SYNAPTIC INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 2)
GenPept4104822synaptojanin 2B, partial
GenPept6634019KIAA0348 protein
GenBankAAD02178.1 synaptojanin 2B [Homo sapiens]
ENSEMBLENSP00000347792Synaptojanin 2 (EC 3.1.3.36) (Synaptic inositol-1,4,5-trisphosphate 5- phosphatase 2). [Homo sapiens]
UCSCGenomeBrowserO15056 
ENSEMBLENSP00000347792 
ENSEMBLENSP00000347792TDI sequence