University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q5VWV5
Original Database ID EN ENSP00000311986.6
Organism Homo sapiens
Annotation subname: full=par-3 partitioning
defective 3 homolog (c. elegans);
Sequence Length 1310

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region568-676
Protein Length1310
Template PDB Code2kohA
Template Region581-689
Sequence Identity97%
E-Value0
GA3411
MPQS1.27911
z-DOPE-1.37
TSVMod MethodMSALL
TSVMod RMSD0.806
TSVMod NO350.979
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2kohnmr structure of mouse par3-pdz3 in complex with ve-cadherin c-terminus
DBALI2kohA 
CATH2.30.42.10 Domain: 2kohA00 Pdz3 Domain (98%)
JenaImageLibrary2koh 
Target Sequence
UniProtKBQ8TEW0Partitioning-defective 3 protein splice variant f
InterProQ8TEW0 
PFAMQ8TEW0 
ProdomQ8TEW0 
UniProtKBQ5VWV5SubName: Full=Par-3 partitioning defective 3 homolog (C. elegans);
InterProQ5VWV5 
PFAMQ5VWV5 
ProdomQ5VWV5 
RefSeqNP_001171717.1 partitioning defective 3 homolog isoform 5 [Homo sapiens]
GenPept18568352AF467006_1 partitioning-defective 3 protein splice variant f
GenPept55960146par-3 partitioning defective 3 homolog (C. elegans)
GenPept55959894par-3 partitioning defective 3 homolog (C. elegans)
GenPept55959484par-3 partitioning defective 3 homolog (C. elegans)
GenPept296278261 partitioning defective 3 homolog isoform 5 [Homo sapiens]
GenPept55957760par-3 partitioning defective 3 homolog (C. elegans)
GenPept55661768par-3 partitioning defective 3 homolog (C. elegans)
GenPept55664548par-3 partitioning defective 3 homolog (C. elegans)
GenBankAAL76046.1AF467006_1 partitioning-defective 3 protein splice variant f [Homo sapiens]
ENSEMBLENSP00000311986Partitioning-defective 3 homolog (PARD-3) (PAR-3) (Atypical PKC isotype-specific interacting protein) (ASIP) (CTCL tumor antigen se2- 5) (PAR3-alpha). [Homo sapiens]
EMBLCAI17329.1 
EMBLCAI17306.1 
EMBLCAI16985.1 
EMBLCAI15036.1 
EMBLCAH71161.1 
EMBLCAH73526.1 
UCSCGenomeBrowserQ8TEW0 
ENSEMBLENSP00000311986 
ENSEMBLENSP00000311986TDI sequence
ENSEMBLENSP00000311986