University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 292411
Original Database ID gi 18860898
Organism Homo sapiens
Annotation receptor-type protein tyrosine
phosphatase gamma
Sequence Length 1445

Dataset Information:

The newest dataset for this sequence was created on 2008-11-05. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region827-1412
Protein Length1445
Template PDB Code2nlkA
Template Region827-1412
Sequence Identity100%
E-Value 0
GA3411
MPQS1.58
z-DOPE-1.39
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO350.963122
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2nlkcrystal structure of d1 and d2 catalytic domains of human protein tyrosine phosphatase gamma (d1+d2 ptprg)
DBALI2nlkA 
CATH3.90.190.10 Domain: 2nlkA01 Protein tyrosine phosphatase superfamily (100%)
JenaImageLibrary2nlk 
Target Sequence
UniProtKBP23470Receptor-type tyrosine-protein phosphatase gamma precursorDE (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma)
InterProP23470 
PFAMP23470 
ProdomP23470 
RefSeqNP_002832.2 protein tyrosine phosphatase, receptor type, G precursor [Homo sapiens]
GenPept915840028Sequence 137 from patent US 9012145
GenPept7223787Sequence 2 from patent US 5891700
GenPept568530851Sequence 10411 from patent US 8586006
GenPept462550PTPG_HUMAN PROTEIN-TYROSINE PHOSPHATASE GAMMA PRECURSOR (R-PTP-GAMMA)
GenPept353304872Sequence 137 from patent US 8039210
GenPept292411receptor-type protein tyrosine phosphatase gamma
GenPept18860898 protein tyrosine phosphatase, receptor type, G precursor [Homo sapiens]
GenPept1610996Sequence 2 from patent US 5532123
GenBankAAA60224.1 receptor-type protein tyrosine phosphatase gamma [Homo sapiens]
UCSCGenomeBrowserP23470 
IPIIPI00011651