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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P49023
Original Database ID gi 4506345
Organism Homo sapiens
Annotation paxillin
Sequence Length 557

Dataset Information:

The newest dataset for this sequence was created on 2008-11-05. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region382-500
Protein Length557
Template PDB Code1rutX
Template Region22-145
Sequence Identity34%
E-Value 8.1e-11
GA3411
MPQS0.45
z-DOPE0.98
TSVMod MethodNO3.5S
TSVMod RMSD
TSVMod NO350.380276
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1rutcomplex of lmo4 lim domains 1 and 2 with the ldb1 lid domain
DBALI1rutX 
JenaImageLibrary1rut 
Target Sequence
UniProtKBB2RAI3SubName: Full=Paxillin;SubName: Full=cDNA, FLJ94932, Homo sapiens paxillin (PXN), mRNA;
InterProB2RAI3 
PFAMB2RAI3 
ProdomB2RAI3 
UniProtKBP49023Paxillin
InterProP49023 
PFAMP49023 
ProdomP49023 
RefSeqNP_002850.1 paxillin [Homo sapiens]
GenPept757075590Sequence 106 from patent US 8907067
GenPept704348paxillin
GenPept568534337Sequence 21049 from patent US 8586006
GenPept4506345 paxillin [Homo sapiens]
GenPept4099533paxillin
GenPept390152691Sequence 106 from patent US 8105826
GenPept1352724PAXI_HUMAN PAXILLIN
GenPept155088519Sequence 106 from patent US 7205146
GenPept187950445Paxillin
GenPept1082680A55933 paxillin - human
GenPept189054360unnamed protein product
GenPept223088263Sequence 6279 from patent US 6812339
GenPept223460550Paxillin
GenPept307685417paxillin, partial
GenBankAAC50104.1 paxillin [Homo sapiens]
GenBankAAI36788.1 Paxillin [Homo sapiens]
GenBankAAI36795.1 Paxillin [Homo sapiens]
GenBankAAD00648.1 paxillin [Homo sapiens]
UCSCGenomeBrowserP49023