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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link 576307
Original Database ID GI 576304
Organism Escherichia coli
Annotation d chain d, modular mutagenesis
of a tim-barrel enzyme: the crystal
structure of a chimeric e. coli
tim having the eighth (beta-alpha)-unit
replaced b ...
Sequence Length 254

Dataset Information:

The newest dataset for this sequence was created on 2003-05-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-249
Protein Length254
Template PDB Code1tpfA
Template Region4-250
Sequence Identity46%
E-Value2e-79
GA3411
DatasetTIMbarrel_templates
ModPipe VersionModPipe1.0
Model Date2003-05-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1tpfcomparison of the structures and the crystal contacts of trypanosomal triosephosphate isomerase in four different crystal forms ; EC: 5.3.1.1 ; PFAM: PF00121 ; SCOP: 28467
DBALI1tpfA 
CATH3.20.20.70 Domain: 1tpfA00 Aldolase class I (99%)
JenaImageLibrary1tpf 
Target Sequence
SFLD576304Structure Function Linkage Database entry: Member of the Nucleophilic Attack 6-bladed Beta-Propeller (N6P) superfamily.
PDB1TMHD Chain D, Modular Mutagenesis Of A Tim-Barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (Beta-Alpha)-Unit Replaced By The Equivalent Unit Of Chicken Tim
PDB1TMHAChain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
PDB1TMHBChain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
PDB1TMHCChain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
PDB1TMHDChain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
GenPept576306C Chain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
GenPept576305B Chain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
GenPept576304A Chain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim
GenPept443779094Sequence 31391 from patent US 8343764
GenPept576307D Chain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal Structure Of A Chimeric E. Coli Tim Having The Eighth (beta-alpha)-unit Replaced By The Equivalent Unit Of Chicken Tim