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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A8K4I2
Original Database ID EN GENSCAN00000029851
Organism Gorilla gorilla gorilla, Homo sapiens
Annotation subname: full=histone 1, h1c;subname:
full=histone h1.2;subname: full=cdna
flj76 039, highly similar to homo
sapiens histone 1, h1c (hist1h1c),
mrna;
Sequence Length 213

Dataset Information:

The newest dataset for this sequence was created on 2016-06-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region36-109
Protein Length213
Template PDB Code1ghcA
Template Region2-75
Sequence Identity88%
E-Value0
GA3411
MPQS1.36472
z-DOPE-0.46
TSVMod MethodMTALL
TSVMod RMSD1.576
TSVMod NO350.922
DatasetMW-Human_D11
ModPipe VersionSVN.r1600
Model Date2016-06-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1ghchomo-and heteronuclear two-dimensional nmr studies of the globular domain of histone h1: full assignment, tertiary structure, and comparison with the globular domain of histone h5 ; SCOP: 16142
DBALI1ghcA 
CATH1.10.10.10 Domain: 1ghcA00 "winged helix" repressor DNA binding domain (99%)
JenaImageLibrary1ghc 
Target Sequence
UniProtKBP16403RecName: Full=Histone H1.2;AltName: Full=Histone H1c;AltName: Full=Histone H1d;AltName: Full=Histone H1s-1;
InterProP16403 
PFAMP16403 
ProdomP16403 
UniProtKBG3QXG2SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000007505};
InterProG3QXG2 
PFAMG3QXG2 
ProdomG3QXG2 
UniProtKBA8K4I2RecName: Full=Histone H1.2;AltName: Full=Histone H1c;AltName: Full=Histone H1d;AltName: Full=Histone H1s-1;
InterProA8K4I2 
PFAMA8K4I2 
ProdomA8K4I2 
UniProtKBA8K4I2SubName: Full=Histone 1, H1c;SubName: Full=Histone H1.2;SubName: Full=cDNA FLJ76039, highly similar to Homo sapiens histone 1, H1c (HIST1H1C), mRNA;
InterProA8K4I2 
PFAMA8K4I2 
ProdomA8K4I2 
UniProtKBG3QXG2SubName: Full=Uncharacterized protein;
InterProG3QXG2 
PFAMG3QXG2 
ProdomG3QXG2 
UniProtKBP16403RecName: Full=Histone H1.2;AltName: Full=Histone H1c;AltName: Full=Histone H1d;AltName: Full=Histone H1s-1;
InterProP16403 
PFAMP16403 
ProdomP16403 
UniProtKBA8K4I2RecName: Full=Histone H1.2;AltName: Full=Histone H1c;AltName: Full=Histone H1d;AltName: Full=Histone H1s-1;
InterProA8K4I2 
PFAMA8K4I2 
ProdomA8K4I2 
UniProtKBP16403.2H12_HUMAN RecName: Full=Histone H1.2; AltName: Full=Histone H1d
InterProP16403.2 
PFAMP16403.2 
ProdomP16403.2 
RefSeqNP_005310.1 histone H1.2 [Homo sapiens]
GenPept197692471histone H1.2, partial
GenPept12803629Histone cluster 1, H1c
GenPept14752125 H1 histone family, member 2 [Homo sapiens]
GenPept158255330unnamed protein product
GenPept167774109histone cluster 1, H1c, partial
GenPept119575919histone 1, H1c
GenPept190689953histone cluster 1, H1c protein, partial
GenPept190691329histone cluster 1, H1c protein
GenPept197692219histone H1.2
GenPept649100441HIST1H1C, partial
GenPept2144736HSHU11 histone H1-2 [validated] - human
GenPept4885375 histone H1.2 [Homo sapiens]
GenPept22770669histone H1
GenPept307685861histone cluster 1, H1c, partial
GenPept31968histone H1
GenPept417101H12_HUMAN RecName: Full=Histone H1.2; AltName: Full=Histone H1d
GenBankEAW55515.1 histone 1, H1c [Homo sapiens]
GenBankACE87439.1 histone cluster 1, H1c protein [synthetic construct]
GenBankACE86751.1 histone cluster 1, H1c protein [synthetic construct]
GenBankABZ92489.1 histone cluster 1, H1c [synthetic construct]
GenBankAAH02649.1 Histone cluster 1, H1c [Homo sapiens]
GenBankAAN06700.1 histone H1 [Homo sapiens]
ENSEMBLENSP00000339566Histone H1.2 (Histone H1d). [Homo sapiens]
EMBLCAA40408.1 
ENSEMBLENSP00000339566 
ENSEMBLENSP00000339566TDI sequence
ENSEMBLGENSCAN00000011325 
ENSEMBLENSP00000339566