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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A1AC55
Original Database ID UP P08532
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=high-affinity l-arabinose
transport system; membrane protein;
Sequence Length 329

Dataset Information:

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Model Information

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Target Region68-292
Protein Length329
Template PDB Code2ns1A
Template Region105-358
Sequence Identity32%
E-Value0.28
GA3410.11
MPQS0.595391
z-DOPE1.43
Datasetecoli_select
ModPipe VersionSVN.r1278
Model Date2010-03-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2ns1crystal structure of the e. coli ammonia channel amtb complexed with the signal transduction protein glnk
DBALI2ns1A 
CATH1.10.3430.10 Domain: 2ns1A00 Ammonium transporter AmtB like domains (63%)
JenaImageLibrary2ns1 
Target Sequence
UniProtKBD7JN47SubName: Full=L-arabinose transport system permease;
InterProD7JN47 
PFAMD7JN47 
ProdomD7JN47 
UniProtKBQ1RAN9SubName: Full=ABC-type arabinose transport system permease component {ECO:0000313|EMBL:ABE07575.1};
InterProQ1RAN9 
PFAMQ1RAN9 
ProdomQ1RAN9 
UniProtKBE6B331SubName: Full=L-arabinose transport system permease protein araH {ECO:0000313|EMBL:EFU98476.1};EC=3.6.3.17 {ECO:0000313|EMBL:EFU98476.1};
InterProE6B331 
PFAME6B331 
ProdomE6B331 
UniProtKBC6VFD2SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;SubName: Full=High-affinity L-arabinose transport protein (ABC superfamily, membrane), subunit of arabinose
InterProC6VFD2 
PFAMC6VFD2 
ProdomC6VFD2 
UniProtKBC6UJY6SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;
InterProC6UJY6 
PFAMC6UJY6 
ProdomC6UJY6 
UniProtKBC5W5E0SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;SubName: Full=High-affinity L-arabinose transport protein (ABC superfamily, membrane), subunit of arabinose
InterProC5W5E0 
PFAMC5W5E0 
ProdomC5W5E0 
UniProtKBB7NBP6SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components {ECO:0000313|EMBL:CAR13386.1};
InterProB7NBP6 
PFAMB7NBP6 
ProdomB7NBP6 
UniProtKBB7MCF8SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components {ECO:0000313|EMBL:CAR03255.1};
InterProB7MCF8 
PFAMB7MCF8 
ProdomB7MCF8 
UniProtKBA1AC55SubName: Full=High-affinity L-arabinose transport system; membrane protein;
InterProA1AC55 
PFAMA1AC55 
ProdomA1AC55 
UniProtKBB7L7U9SubName: Full=AraH protein {ECO:0000313|EMBL:CAU97938.1};
InterProB7L7U9 
PFAMB7L7U9 
ProdomB7L7U9 
UniProtKBB1X660SubName: Full=Subunit of L-arabinose ABC transporter containing membrane components;
InterProB1X660 
PFAMB1X660 
ProdomB1X660 
UniProtKBG2CZM2SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2CZM2 
PFAMG2CZM2 
ProdomG2CZM2 
UniProtKBG2AW20SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2AW20 
PFAMG2AW20 
ProdomG2AW20 
UniProtKBG2BAH0SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2BAH0 
PFAMG2BAH0 
ProdomG2BAH0 
UniProtKBF4SLD3SubName: Full=L-arabinose ABC transporter, permease protein AraH {ECO:0000313|EMBL:EGI11532.1};
InterProF4SLD3 
PFAMF4SLD3 
ProdomF4SLD3 
UniProtKBE3Y0C1SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProE3Y0C1 
PFAME3Y0C1 
ProdomE3Y0C1 
UniProtKBE3PAJ9SubName: Full=L-arabinose ABC transporter, permease protein {ECO:0000313|EMBL:CBJ01434.1};
InterProE3PAJ9 
PFAME3PAJ9 
ProdomE3PAJ9 
UniProtKBA0A0H2Z091SubName: Full=High-affinity L-arabinose transport system membrane protein {ECO:0000313|EMBL:ABJ01245.1};
InterProA0A0H2Z091 
PFAMA0A0H2Z091 
ProdomA0A0H2Z091 
UniProtKBE2WQ60SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProE2WQ60 
PFAME2WQ60 
ProdomE2WQ60 
UniProtKBA0A024L2C7SubName: Full=ABC-type arabinose transport system permease component {ECO:0000313|EMBL:CDP71063.1};
InterProA0A024L2C7 
PFAMA0A024L2C7 
ProdomA0A024L2C7 
UniProtKBH0QD76SubName: Full=Fused L-arabinose transporter subunits;
InterProH0QD76 
PFAMH0QD76 
ProdomH0QD76 
UniProtKBA0A024KXK9SubName: Full=ABC-type arabinose transport system permease component {ECO:0000313|EMBL:CDP69373.1};
InterProA0A024KXK9 
PFAMA0A024KXK9 
ProdomA0A024KXK9 
UniProtKBF4TFM9SubName: Full=L-arabinose ABC transporter, permease protein AraH {ECO:0000313|EMBL:EGI21476.1};
InterProF4TFM9 
PFAMF4TFM9 
ProdomF4TFM9 
UniProtKBD2AI89SubName: Full=L-arabinose transport system permease protein araH {ECO:0000313|EMBL:ADA74328.1};
InterProD2AI89 
PFAMD2AI89 
ProdomD2AI89 
UniProtKBD6IR18SubName: Full=L-arabinose transport system permease;
InterProD6IR18 
PFAMD6IR18 
ProdomD6IR18 
UniProtKBA1AC55SubName: Full=High-affinity L-arabinose transport system; membrane protein;
InterProA1AC55 
PFAMA1AC55 
ProdomA1AC55 
UniProtKBA0A7U8ZG60SubName: Full=L-arabinose transport system permease {ECO:0000313|EMBL:EFF00623.2}
InterProA0A7U8ZG60 
PFAMA0A7U8ZG60 
ProdomA0A7U8ZG60 
UniProtKBF4TFM9SubName: Full=L-arabinose ABC transporter, permease protein AraH;
InterProF4TFM9 
PFAMF4TFM9 
ProdomF4TFM9 
UniProtKBA0A7U8NDW2SubName: Full=L-arabinose ABC transporter permease AraH {ECO:0000313|EMBL:EFA8318553.1}
InterProA0A7U8NDW2 
PFAMA0A7U8NDW2 
ProdomA0A7U8NDW2 
UniProtKBA0A7U8X7U7SubName: Full=L-arabinose transport system permease {ECO:0000313|EMBL:EFI19988.1}
InterProA0A7U8X7U7 
PFAMA0A7U8X7U7 
ProdomA0A7U8X7U7 
UniProtKBG2CZM2SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2CZM2 
PFAMG2CZM2 
ProdomG2CZM2 
UniProtKBA0A8E2M1I5SubName: Full=L-arabinose ABC transporter, permease protein AraH {ECO:0000313|EMBL:OSL39265.1}
InterProA0A8E2M1I5 
PFAMA0A8E2M1I5 
ProdomA0A8E2M1I5 
UniProtKBA0A7U8QS47SubName: Full=L-arabinose ABC transporter permease AraH {ECO:0000313|EMBL:EFA4297872.1}
InterProA0A7U8QS47 
PFAMA0A7U8QS47 
ProdomA0A7U8QS47 
UniProtKBA0A828R8C0SubName: Full=L-arabinose transport system permease protein araH {ECO:0000313|EMBL:EFU98476.1}EC=3.6.3.17 {ECO:0000313|EMBL:EFU98476.1}
InterProA0A828R8C0 
PFAMA0A828R8C0 
ProdomA0A828R8C0 
UniProtKBA0A854NRJ9SubName: Full=L-arabinose ABC transporter permease AraH {ECO:0000313|EMBL:OWR12629.1}EC=3.6.3.17 {ECO:0000313|EMBL:OWR12629.1}
InterProA0A854NRJ9 
PFAMA0A854NRJ9 
ProdomA0A854NRJ9 
UniProtKBG2AW20SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2AW20 
PFAMG2AW20 
ProdomG2AW20 
UniProtKBE2WQ60SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProE2WQ60 
PFAME2WQ60 
ProdomE2WQ60 
UniProtKBE3Y0C1SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProE3Y0C1 
PFAME3Y0C1 
ProdomE3Y0C1 
UniProtKBD7JN47SubName: Full=L-arabinose transport system permease;
InterProD7JN47 
PFAMD7JN47 
ProdomD7JN47 
UniProtKBD6IR18SubName: Full=L-arabinose transport system permease;
InterProD6IR18 
PFAMD6IR18 
ProdomD6IR18 
UniProtKBD2AI89SubName: Full=L-arabinose transport system permease protein araH;
InterProD2AI89 
PFAMD2AI89 
ProdomD2AI89 
UniProtKBE6B331SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProE6B331 
PFAME6B331 
ProdomE6B331 
UniProtKBC6VFD2SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;SubName: Full=High-affinity L-arabinose transport protein (ABC superfamily, membrane), subunit of arabinose
InterProC6VFD2 
PFAMC6VFD2 
ProdomC6VFD2 
UniProtKBC6UJY6SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;
InterProC6UJY6 
PFAMC6UJY6 
ProdomC6UJY6 
UniProtKBC5W5E0SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;SubName: Full=High-affinity L-arabinose transport protein (ABC superfamily, membrane), subunit of arabinose
InterProC5W5E0 
PFAMC5W5E0 
ProdomC5W5E0 
UniProtKBB7NBP6SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;
InterProB7NBP6 
PFAMB7NBP6 
ProdomB7NBP6 
UniProtKBB7MCF8SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;
InterProB7MCF8 
PFAMB7MCF8 
ProdomB7MCF8 
UniProtKBB7L7U9SubName: Full=Fused L-arabinose transporter subunits of ABC superfamily: membrane components;
InterProB7L7U9 
PFAMB7L7U9 
ProdomB7L7U9 
UniProtKBB1X660SubName: Full=Subunit of L-arabinose ABC transporter containing membrane components;
InterProB1X660 
PFAMB1X660 
ProdomB1X660 
UniProtKBG2BAH0SubName: Full=L-arabinose transport system permease protein araH;EC=3.6.3.17;
InterProG2BAH0 
PFAMG2BAH0 
ProdomG2BAH0 
UniProtKBE3PAJ9SubName: Full=L-arabinose ABC transporter, permease protein;
InterProE3PAJ9 
PFAME3PAJ9 
ProdomE3PAJ9 
UniProtKBA0A5E8GDG3SubName: Full=ABC-type arabinose transport system permease component {ECO:0000313|EMBL:CDU36564.1}
InterProA0A5E8GDG3 
PFAMA0A5E8GDG3 
ProdomA0A5E8GDG3 
UniProtKBA0A1X3KC64SubName: Full=L-arabinose ABC transporter, permease protein AraH {ECO:0000313|EMBL:OSL44807.1}
InterProA0A1X3KC64 
PFAMA0A1X3KC64 
ProdomA0A1X3KC64 
UniProtKBH0QD76SubName: Full=Fused L-arabinose transporter subunits;
InterProH0QD76 
PFAMH0QD76 
ProdomH0QD76 
UniProtKBQ1RAN9SubName: Full=ABC-type arabinose transport system permease component;
InterProQ1RAN9 
PFAMQ1RAN9 
ProdomQ1RAN9 
UniProtKBF4SLD3SubName: Full=L-arabinose ABC transporter, permease protein AraH;
InterProF4SLD3 
PFAMF4SLD3 
ProdomF4SLD3 
UniProtKBP08532L-arabinose transport system permease protein araH (EC 3.6.3.17)
InterProP08532 
PFAMP08532 
ProdomP08532 
UniProtKBP0AE26L-arabinose transport system permease protein araH
InterProP0AE26 
PFAMP0AE26 
ProdomP0AE26 
UniProtKBP0AE27L-arabinose transport system permease protein araH
InterProP0AE27 
PFAMP0AE27 
ProdomP0AE27 
RefSeqAP_002517.1 fused L-arabinose transporter subunits and membrane components of ABC superfamily [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_707790.1 L-arabinose transporter permease protein [Shigella flexneri 2a str. 301]
RefSeqYP_852959.1 L-arabinose transporter permease protein [Escherichia coli APEC O1]
RefSeqYP_002391672.1 L-arabinose transporter permease protein [Escherichia coli S88]
RefSeqZP_06649380.1 L-arabinose transport system permease [Escherichia coli FVEC1412]
RefSeqYP_002403129.1 L-arabinose transporter permease protein [Escherichia coli 55989]
RefSeqNP_837518.1 L-arabinose transporter permease protein [Shigella flexneri 2a str. 2457T]
RefSeqYP_003045064.1 L-arabinose transporter permease [Escherichia coli B str. REL606]
RefSeqYP_001730870.1 subunit of L-arabinose ABC transporter containing membrane components [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_06990631.1 L-arabinose transport system permease [Escherichia coli FVEC1302]
RefSeqZP_00735505.1 COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Escherichia coli 53638]
RefSeqZP_00719526.1 COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Escherichia coli E110019]
RefSeqYP_541106.1 L-arabinose transporter permease protein [Escherichia coli UTI89]
RefSeqYP_002412915.1 L-arabinose transporter permease protein [Escherichia coli UMN026]
RefSeqYP_002999648.1 hypothetical protein B21_01856 [Escherichia coli BL21]
RefSeqYP_003054492.1 fused L-arabinose transporter subunits of ABC superfamily: membrane components [Escherichia coli BL21(DE3)]
GenPept309702119L-arabinose ABC transporter, permease protein
GenPept91072694ABC-type arabinose transport system permease component
GenPept218558759 L-arabinose transporter permease protein [Escherichia coli S88]
GenPept218432493fused L-arabinose transporter subunits of ABC superfamily: membrane components
GenPept218365528fused L-arabinose transporter subunits of ABC superfamily: membrane components
GenPept91211120 L-arabinose transporter permease protein [Escherichia coli UTI89]
GenPept1736557fused L-arabinose transporter subunits and membrane components of ABC superfamily
GenPept170081550 subunit of L-arabinose ABC transporter containing membrane components [Escherichia coli str. K-12 substr. DH10B]
GenPept169889385subunit of L-arabinose ABC transporter containing membrane components
GenPept915294905Sequence 40764 from patent US 8952217
GenPept117624046 L-arabinose transporter permease [Escherichia coli APEC O1]
GenPept915308003Sequence 61375 from patent US 8952217
GenPept218695462 L-arabinose transporter permease protein [Escherichia coli 55989]
GenPept218705396 L-arabinose transporter permease protein [Escherichia coli UMN026]
GenPept30063347 L-arabinose transporter permease protein [Shigella flexneri 2a str. 2457T]
GenPept30041599L-arabinose transport system permease protein
GenPept298381032 L-arabinose transport system permease [Escherichia coli FVEC1302]
GenPept331039312L-arabinose ABC transporter, permease protein AraH
GenPept293405388 L-arabinose transport system permease [Escherichia coli FVEC1412]
GenPept291427596L-arabinose transport system permease
GenPept281601344L-arabinose transport system permease protein araH
GenPept254288744 fused L-arabinose transporter subunits of ABC superfamily: membrane components [Escherichia coli BL21(DE3)]
GenPept298278474L-arabinose transport system permease
GenPept89108737 fused L-arabinose transporter subunits and membrane components of ABC superfamily [Escherichia coli str. K-12 substr. W3110]
GenPept24052285L-arabinose transport system permease protein