University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link 1353776
Original Database ID gi 1353776
Organism Homo sapiens
Annotation transcription factor nfat1 isoform
c
Sequence Length 925
 

SNP Information

Perform action on this model:

 
 
SNP ViewGenome
Browser		ResidueAA-Residue
Variants		InterfaceLigandStabilityValidated
rs6067785 T612 TN  
rs12479626 H446 HR  
3 SNPs found but only 2 displayed. (SNPs in modeled regions)
 

Sequence Model Coverage summary
for all models of this sequence

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1p7hstructure of nfat1 bound as a dimer to the hiv-1 ltr kb element
DBALI1p7hL 
CATH2.60.40.340 Domain: 1p7hL01 Immunoglobulin-like (100%)
CATH2.60.40.10 Domain: 1p7hL02 Immunoglobulins (100%)
JenaImageLibrary1p7h 
Target Sequence
UniProtKBQ13469Nuclear factor of activated T-cells, cytoplasmic 2 (T cellDE transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp)
InterProQ13469 
PFAMQ13469 
ProdomQ13469 
GenPept1353776transcription factor NFAT1 isoform C
GenPept8928264NFC2_HUMAN NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2 (T CELL TRANSCRIPTION FACTOR NFAT1) (NFAT PRE-EXISTING SUB
GenBankAAC50887.1 transcription factor NFAT1 isoform C [Homo sapiens]
UCSCGenomeBrowserQ13469