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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A090JIE7
Original Database ID
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=threonine-rich inner
membrane protein gfca {eco:0000313|embl:kgm68
929.1};subname: full=uncharacterized
protein {eco:0000313|embl:cee103
...
Sequence Length 107

Dataset Information:

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Model Information

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Target Region12-104
Protein Length107
Template PDB Code2k3nA
Template Region34-129
Sequence Identity34%
E-Value0.023
GA3410.02
MPQS1.13216
z-DOPE0.35
Datasetcsmp_9-09
ModPipe VersionSVNx.x
Model Date2009-10-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2k3nsolution structure of the type 1 repetitive domain (tusp1-rp1) of the egg case silk from nephila antipodiana
DBALI2k3nA 
JenaImageLibrary2k3n 
Target Sequence
UniProtKBB6I962SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76573.1};
InterProB6I962 
PFAMB6I962 
ProdomB6I962 
UniProtKBF8XH11SubName: Full=Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EGU95959.1};
InterProF8XH11 
PFAMF8XH11 
ProdomF8XH11 
UniProtKBE7IZI2SubName: Full=Putative uncharacterized protein;
InterProE7IZI2 
PFAME7IZI2 
ProdomE7IZI2 
UniProtKBD8AQJ2SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK14587.1};
InterProD8AQJ2 
PFAMD8AQJ2 
ProdomD8AQJ2 
UniProtKBE1I130SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK73972.1};
InterProE1I130 
PFAME1I130 
ProdomE1I130 
UniProtKBE1HGP5SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK92925.1};
InterProE1HGP5 
PFAME1HGP5 
ProdomE1HGP5 
UniProtKBD8ETJ8SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK49091.1};
InterProD8ETJ8 
PFAMD8ETJ8 
ProdomD8ETJ8 
UniProtKBA0A090JIE7SubName: Full=Threonine-rich inner membrane protein gfcA {ECO:0000313|EMBL:KGM68929.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEE10356.1};
InterProA0A090JIE7 
PFAMA0A090JIE7 
ProdomA0A090JIE7 
UniProtKBA0A0A0FAD8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM59430.1};
InterProA0A0A0FAD8 
PFAMA0A0A0FAD8 
ProdomA0A0A0FAD8 
UniProtKBA0A0E1ST88SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:EDU62126.1};
InterProA0A0E1ST88 
PFAMA0A0E1ST88 
ProdomA0A0E1ST88 
UniProtKBD8EBC1SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK44654.1};
InterProD8EBC1 
PFAMD8EBC1 
ProdomD8EBC1 
UniProtKBA7ZK90SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ABV18054.1};
InterProA7ZK90 
PFAMA7ZK90 
ProdomA7ZK90 
UniProtKBD8B6R8SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFJ65219.1};
InterProD8B6R8 
PFAMD8B6R8 
ProdomD8B6R8 
UniProtKBB2N554SubName: Full=Putative inner membrane protein;
InterProB2N554 
PFAMB2N554 
ProdomB2N554 
UniProtKBD7YLG0SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFK01860.1};
InterProD7YLG0 
PFAMD7YLG0 
ProdomD7YLG0 
UniProtKBB2TTQ8SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ACD06324.1};
InterProB2TTQ8 
PFAMB2TTQ8 
ProdomB2TTQ8 
UniProtKBE1IPZ3SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFO58589.1};
InterProE1IPZ3 
PFAME1IPZ3 
ProdomE1IPZ3 
UniProtKBH4ZST0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHW22479.1};
InterProH4ZST0 
PFAMH4ZST0 
ProdomH4ZST0 
UniProtKBK5H8L3SubName: Full=Uncharacterized protein;
InterProK5H8L3 
PFAMK5H8L3 
ProdomK5H8L3 
UniProtKBM8U5L6SubName: Full=Uncharacterized protein;
InterProM8U5L6 
PFAMM8U5L6 
ProdomM8U5L6 
UniProtKBN3EH21SubName: Full=Uncharacterized protein;
InterProN3EH21 
PFAMN3EH21 
ProdomN3EH21 
UniProtKBN4L9Y3SubName: Full=Uncharacterized protein;
InterProN4L9Y3 
PFAMN4L9Y3 
ProdomN4L9Y3 
UniProtKBN4SIR9SubName: Full=Uncharacterized protein;
InterProN4SIR9 
PFAMN4SIR9 
ProdomN4SIR9 
UniProtKBN4T5W5SubName: Full=Uncharacterized protein;
InterProN4T5W5 
PFAMN4T5W5 
ProdomN4T5W5 
UniProtKBU9YM34SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:ESA73677.1};
InterProU9YM34 
PFAMU9YM34 
ProdomU9YM34 
UniProtKBV0YXF2SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:ESD77188.1};
InterProV0YXF2 
PFAMV0YXF2 
ProdomV0YXF2 
UniProtKBK5GYH5SubName: Full=Uncharacterized protein;
InterProK5GYH5 
PFAMK5GYH5 
ProdomK5GYH5 
UniProtKBV1AKF5SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:ESE07283.1};
InterProV1AKF5 
PFAMV1AKF5 
ProdomV1AKF5 
UniProtKBH5C3V7SubName: Full=Uncharacterized protein;
InterProH5C3V7 
PFAMH5C3V7 
ProdomH5C3V7 
UniProtKBQ31YQ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABB66808.1};
InterProQ31YQ0 
PFAMQ31YQ0 
ProdomQ31YQ0 
UniProtKBI0ZPX4SubName: Full=Uncharacterized protein;
InterProI0ZPX4 
PFAMI0ZPX4 
ProdomI0ZPX4 
UniProtKBF8XH11SubName: Full=Threonine-rich inner membrane protein GfcA;
InterProF8XH11 
PFAMF8XH11 
ProdomF8XH11 
UniProtKBH5C3V7SubName: Full=Uncharacterized protein;
InterProH5C3V7 
PFAMH5C3V7 
ProdomH5C3V7 
UniProtKBD7YLG0SubName: Full=Putative uncharacterized protein;
InterProD7YLG0 
PFAMD7YLG0 
ProdomD7YLG0 
UniProtKBH4ZST0SubName: Full=Uncharacterized protein;
InterProH4ZST0 
PFAMH4ZST0 
ProdomH4ZST0 
UniProtKBD8AQJ2SubName: Full=Putative uncharacterized protein;
InterProD8AQJ2 
PFAMD8AQJ2 
ProdomD8AQJ2 
UniProtKBQ31YQ0SubName: Full=Putative uncharacterized protein ymcD;
InterProQ31YQ0 
PFAMQ31YQ0 
ProdomQ31YQ0 
UniProtKBE1IPZ3SubName: Full=Putative uncharacterized protein;
InterProE1IPZ3 
PFAME1IPZ3 
ProdomE1IPZ3 
UniProtKBD8B6R8SubName: Full=Putative uncharacterized protein;
InterProD8B6R8 
PFAMD8B6R8 
ProdomD8B6R8 
UniProtKBI0ZPX4SubName: Full=Uncharacterized protein;
InterProI0ZPX4 
PFAMI0ZPX4 
ProdomI0ZPX4 
UniProtKBE1I130SubName: Full=Putative uncharacterized protein;
InterProE1I130 
PFAME1I130 
ProdomE1I130 
UniProtKBE1HGP5SubName: Full=Putative uncharacterized protein;
InterProE1HGP5 
PFAME1HGP5 
ProdomE1HGP5 
UniProtKBD8EBC1SubName: Full=Putative uncharacterized protein;
InterProD8EBC1 
PFAMD8EBC1 
ProdomD8EBC1 
UniProtKBD8ETJ8SubName: Full=Putative uncharacterized protein;
InterProD8ETJ8 
PFAMD8ETJ8 
ProdomD8ETJ8 
UniProtKBB6I962SubName: Full=Putative uncharacterized protein;
InterProB6I962 
PFAMB6I962 
ProdomB6I962 
UniProtKBB2TTQ8SubName: Full=Putative inner membrane protein;
InterProB2TTQ8 
PFAMB2TTQ8 
ProdomB2TTQ8 
UniProtKBB2N554SubName: Full=Putative inner membrane protein;
InterProB2N554 
PFAMB2N554 
ProdomB2N554 
UniProtKBE7IZI2SubName: Full=Putative uncharacterized protein;
InterProE7IZI2 
PFAME7IZI2 
ProdomE7IZI2 
UniProtKBA0A979H2P0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76573.1}
InterProA0A979H2P0 
PFAMA0A979H2P0 
ProdomA0A979H2P0 
UniProtKBA7ZK90SubName: Full=Putative inner membrane protein;
InterProA7ZK90 
PFAMA7ZK90 
ProdomA7ZK90 
UniProtKBP75885Inner membrane protein ymcD
InterProP75885 
PFAMP75885 
ProdomP75885 
RefSeqYP_001880815.1 putative inner membrane protein [Shigella boydii CDC 3083-94]
RefSeqYP_001462219.1 putative inner membrane protein [Escherichia coli E24377A]
RefSeqYP_002292324.1 hypothetical protein ECSE_1049 [Escherichia coli SE11]
RefSeqYP_408636.1 hypothetical protein SBO_2243 [Shigella boydii Sb227]
RefSeqZP_02999094.1 putative inner membrane protein [Escherichia coli 53638]
RefSeqZP_07099630.1 conserved hypothetical protein [Escherichia coli MS 107-1]
RefSeqZP_07104076.1 conserved hypothetical protein [Escherichia coli MS 119-7]
RefSeqZP_07141217.1 hypothetical protein HMPREF9548_03409 [Escherichia coli MS 182-1]
RefSeqZP_07163622.1 conserved hypothetical protein [Escherichia coli MS 116-1]
RefSeqZP_07243558.1 conserved hypothetical protein [Escherichia coli MS 146-1]
RefSeqZP_07220445.1 conserved hypothetical protein [Escherichia coli MS 78-1]
RefSeqZP_07170040.1 hypothetical protein HMPREF9547_03596 [Escherichia coli MS 175-1]
GenPept300450967 conserved hypothetical protein [Escherichia coli MS 116-1]
GenPept1787222orf, hypothetical protein; putative membrane glycoprotein
GenPept301643512 conserved hypothetical protein [Escherichia coli MS 146-1]
GenPept187427050putative inner membrane protein
GenPept187730058 putative inner membrane protein [Shigella boydii CDC 3083-94]
GenPept188487023 putative inner membrane protein [Escherichia coli 53638]
GenPept188491824 putative inner membrane protein [Escherichia coli 53638]
GenPept16128953 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept157156316 putative inner membrane protein [Escherichia coli E24377A]
GenPept157078346putative inner membrane protein
GenPept3025225YMCD_ECOLI HYPOTHETICAL 10.2 KDA PROTEIN IN APPA-CSPH INTERGENIC REGION
GenPept300925327 hypothetical protein HMPREF9548_03409 [Escherichia coli MS 182-1]
GenPept4062547Integumentary mucin c.1 (fim-c.1
GenPept4062704Integumentary mucin c.1 (fim-c.1
GenPept7466819A64840 probable membrane protein ymcD - Escherichia coli
GenPept81246100conserved hypothetical protein
GenPept82544689 hypothetical protein SBO_2243 [Shigella boydii Sb227]
GenPept209911499conserved hypothetical protein
GenPept209918240 hypothetical protein ECSE_1049 [Escherichia coli SE11]
GenPept301078119 conserved hypothetical protein [Escherichia coli MS 146-1]
GenPept300315435 hypothetical protein HMPREF9547_03596 [Escherichia coli MS 175-1]
GenPept300957864 hypothetical protein HMPREF9547_03596 [Escherichia coli MS 175-1]
GenPept300949636 conserved hypothetical protein [Escherichia coli MS 116-1]
GenPept301327179 conserved hypothetical protein [Escherichia coli MS 78-1]
GenPept300846212 conserved hypothetical protein [Escherichia coli MS 78-1]
GenPept300823953 conserved hypothetical protein [Escherichia coli MS 119-7]
GenPept300819433 conserved hypothetical protein [Escherichia coli MS 107-1]
GenPept300528029 conserved hypothetical protein [Escherichia coli MS 107-1]
GenPept300523585 conserved hypothetical protein [Escherichia coli MS 119-7]
GenPept300418549 hypothetical protein HMPREF9548_03409 [Escherichia coli MS 182-1]
GenBankEFK01860.1 hypothetical protein HMPREF9548_03409 [Escherichia coli MS 182-1]
GenBankEDU62126.1 putative inner membrane protein [Escherichia coli 53638]
GenBankEFJ65219.1 hypothetical protein HMPREF9547_03596 [Escherichia coli MS 175-1]
GenBankEFK14587.1 conserved hypothetical protein [Escherichia coli MS 116-1]
GenBankEFK44654.1 conserved hypothetical protein [Escherichia coli MS 119-7]
GenBankEFK49091.1 conserved hypothetical protein [Escherichia coli MS 107-1]
GenBankEFK73972.1 conserved hypothetical protein [Escherichia coli MS 78-1]