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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75885.2
Original Database ID ref NP_415507.2
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation gfca_ecoli recname: full=threonine-rich
inner membrane protein gfca; altname:
fu ll=group 4 capsule protein
a homolog; flags: precursor
Sequence Length 101

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region6-98
Protein Length101
Template PDB Code2k3nA
Template Region34-129
Sequence Identity34%
E-Value0.1
GA3410.02
MPQS1.19419
z-DOPE0.25
TSVMod MethodMSALL
TSVMod RMSD18.741
TSVMod NO350.05
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2k3nsolution structure of the type 1 repetitive domain (tusp1-rp1) of the egg case silk from nephila antipodiana
DBALI2k3nA 
JenaImageLibrary2k3n 
Target Sequence
UniProtKBH4YU22SubName: Full=Uncharacterized protein;
InterProH4YU22 
PFAMH4YU22 
ProdomH4YU22 
UniProtKBA0A070YET5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX90142.1};
InterProA0A070YET5 
PFAMA0A070YET5 
ProdomA0A070YET5 
UniProtKBA0A071C7Z0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY87135.1};
InterProA0A071C7Z0 
PFAMA0A071C7Z0 
ProdomA0A071C7Z0 
UniProtKBA0A073H8F8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ69747.1};
InterProA0A073H8F8 
PFAMA0A073H8F8 
ProdomA0A073H8F8 
UniProtKBA0A073TN10SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL20899.1};
InterProA0A073TN10 
PFAMA0A073TN10 
ProdomA0A073TN10 
UniProtKBA0A074I150SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO00613.1};
InterProA0A074I150 
PFAMA0A074I150 
ProdomA0A074I150 
UniProtKBA0A079DSN4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY23466.1};
InterProA0A079DSN4 
PFAMA0A079DSN4 
ProdomA0A079DSN4 
UniProtKBA0A080GWS2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN91752.1};
InterProA0A080GWS2 
PFAMA0A080GWS2 
ProdomA0A080GWS2 
UniProtKBA0A080IAF1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO26954.1};
InterProA0A080IAF1 
PFAMA0A080IAF1 
ProdomA0A080IAF1 
UniProtKBA0A0E1LVM4SubName: Full=O-antigen capsule production threonine-rich inner membrane protein {ECO:0000313|EMBL:AJF55755.1};
InterProA0A0E1LVM4 
PFAMA0A0E1LVM4 
ProdomA0A0E1LVM4 
UniProtKBA0A0E2A218SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:EIL31600.1};
InterProA0A0E2A218 
PFAMA0A0E2A218 
ProdomA0A0E2A218 
UniProtKBA0A070DC25SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV38648.1};
InterProA0A070DC25 
PFAMA0A070DC25 
ProdomA0A070DC25 
UniProtKBA0A070CM29SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV27019.1};
InterProA0A070CM29 
PFAMA0A070CM29 
ProdomA0A070CM29 
UniProtKBG5UJY7SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5UJY7 
PFAMG5UJY7 
ProdomG5UJY7 
UniProtKBB1X8U0SubName: Full=Predicted protein;
InterProB1X8U0 
PFAMB1X8U0 
ProdomB1X8U0 
UniProtKBB3HC64SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIF59946.1};
InterProB3HC64 
PFAMB3HC64 
ProdomB3HC64 
UniProtKBH5AB87SubName: Full=Uncharacterized protein;
InterProH5AB87 
PFAMH5AB87 
ProdomH5AB87 
UniProtKBH5AS07SubName: Full=Uncharacterized protein;
InterProH5AS07 
PFAMH5AS07 
ProdomH5AS07 
UniProtKBB7LF95SubName: Full=YmcD protein {ECO:0000313|EMBL:CAU96957.1};
InterProB7LF95 
PFAMB7LF95 
ProdomB7LF95 
UniProtKBH5CJE5SubName: Full=Uncharacterized protein;
InterProH5CJE5 
PFAMH5CJE5 
ProdomH5CJE5 
UniProtKBC4ZQB3SubName: Full=Predicted protein;
InterProC4ZQB3 
PFAMC4ZQB3 
ProdomC4ZQB3 
UniProtKBH5CZU7SubName: Full=Uncharacterized protein;
InterProH5CZU7 
PFAMH5CZU7 
ProdomH5CZU7 
UniProtKBC6EHM0SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ACT29629.1};
InterProC6EHM0 
PFAMC6EHM0 
ProdomC6EHM0 
UniProtKBC6UF98SubName: Full=Putative uncharacterized protein ymcD;
InterProC6UF98 
PFAMC6UF98 
ProdomC6UF98 
UniProtKBA0A0H3X3Q8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34555.1};
InterProA0A0H3X3Q8 
PFAMA0A0H3X3Q8 
ProdomA0A0H3X3Q8 
UniProtKBD8BVC0SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EFI89397.1};
InterProD8BVC0 
PFAMD8BVC0 
ProdomD8BVC0 
UniProtKBG5TG24SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5TG24 
PFAMG5TG24 
ProdomG5TG24 
UniProtKBG1ZXH6SubName: Full=Putative uncharacterized protein;
InterProG1ZXH6 
PFAMG1ZXH6 
ProdomG1ZXH6 
UniProtKBF8YEB0SubName: Full=Putative uncharacterized protein;
InterProF8YEB0 
PFAMF8YEB0 
ProdomF8YEB0 
UniProtKBC8UMC7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI35047.1};
InterProC8UMC7 
PFAMC8UMC7 
ProdomC8UMC7 
UniProtKBG5WHQ9SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5WHQ9 
PFAMG5WHQ9 
ProdomG5WHQ9 
UniProtKBG5YDM8SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5YDM8 
PFAMG5YDM8 
ProdomG5YDM8 
UniProtKBG5XNY0SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5XNY0 
PFAMG5XNY0 
ProdomG5XNY0 
UniProtKBA0A025G176SubName: Full=Membrane protein {ECO:0000313|EMBL:EYV58632.1};
InterProA0A025G176 
PFAMA0A025G176 
ProdomA0A025G176 
UniProtKBA0A026H225SubName: Full=Membrane protein {ECO:0000313|EMBL:EYY75839.1};
InterProA0A026H225 
PFAMA0A026H225 
ProdomA0A026H225 
UniProtKBA0A026UWE2SubName: Full=Membrane protein {ECO:0000313|EMBL:EZA33956.1};
InterProA0A026UWE2 
PFAMA0A026UWE2 
ProdomA0A026UWE2 
UniProtKBG2ADS5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGW94725.1};
InterProG2ADS5 
PFAMG2ADS5 
ProdomG2ADS5 
UniProtKBG2ASI8SubName: Full=Putative uncharacterized protein;
InterProG2ASI8 
PFAMG2ASI8 
ProdomG2ASI8 
UniProtKBF9CG64SubName: Full=Putative uncharacterized protein;
InterProF9CG64 
PFAMF9CG64 
ProdomF9CG64 
UniProtKBE8Y241SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ADX51436.1};
InterProE8Y241 
PFAME8Y241 
ProdomE8Y241 
UniProtKBE9W5Q6SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE9W5Q6 
PFAME9W5Q6 
ProdomE9W5Q6 
UniProtKBE7H8I1SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE7H8I1 
PFAME7H8I1 
ProdomE7H8I1 
UniProtKBF3WGT0SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI97537.1};
InterProF3WGT0 
PFAMF3WGT0 
ProdomF3WGT0 
UniProtKBE9YAX6SubName: Full=Threonine-rich inner membrane protein gfcA {ECO:0000313|EMBL:EGB68329.1};
InterProE9YAX6 
PFAME9YAX6 
ProdomE9YAX6 
UniProtKBF4UL45SubName: Full=Threonine-rich inner membrane protein GfcA;
InterProF4UL45 
PFAMF4UL45 
ProdomF4UL45 
UniProtKBE9XXH7SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE9XXH7 
PFAME9XXH7 
ProdomE9XXH7 
UniProtKBE3PJ10SubName: Full=Predicted transmembrane protein {ECO:0000313|EMBL:CBJ00565.1};
InterProE3PJ10 
PFAME3PJ10 
ProdomE3PJ10 
UniProtKBG0F843SubName: Full=Threonine-rich inner membrane protein gfcA {ECO:0000313|EMBL:AEJ55778.1};
InterProG0F843 
PFAMG0F843 
ProdomG0F843 
UniProtKBF9HWE6SubName: Full=Threonine-rich inner membrane protein gfcA;SubName: Full=Uncharacterized protein;
InterProF9HWE6 
PFAMF9HWE6 
ProdomF9HWE6 
UniProtKBA0A027U4W7SubName: Full=Membrane protein {ECO:0000313|EMBL:EZD32683.1};
InterProA0A027U4W7 
PFAMA0A027U4W7 
ProdomA0A027U4W7 
UniProtKBH4UGP1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV62219.1};
InterProH4UGP1 
PFAMH4UGP1 
ProdomH4UGP1 
UniProtKBA0A027ZMH1SubName: Full=Membrane protein {ECO:0000313|EMBL:EZD99948.1};
InterProA0A027ZMH1 
PFAMA0A027ZMH1 
ProdomA0A027ZMH1 
UniProtKBH5B7J1SubName: Full=Uncharacterized protein;
InterProH5B7J1 
PFAMH5B7J1 
ProdomH5B7J1 
UniProtKBA0A069XAV5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU27067.1};
InterProA0A069XAV5 
PFAMA0A069XAV5 
ProdomA0A069XAV5 
UniProtKBA0A071CEJ6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ16780.1};
InterProA0A071CEJ6 
PFAMA0A071CEJ6 
ProdomA0A071CEJ6 
UniProtKBA0A080EP37SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN50810.1};
InterProA0A080EP37 
PFAMA0A080EP37 
ProdomA0A080EP37 
UniProtKBA0A0E2TNG2SubName: Full=Membrane protein {ECO:0000313|EMBL:EYV10404.1};
InterProA0A0E2TNG2 
PFAMA0A0E2TNG2 
ProdomA0A0E2TNG2 
UniProtKBE9X5F4SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE9X5F4 
PFAME9X5F4 
ProdomE9X5F4 
UniProtKBF4VD14SubName: Full=Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EGI46765.1};
InterProF4VD14 
PFAMF4VD14 
ProdomF4VD14 
UniProtKBG1ZH43SubName: Full=Putative uncharacterized protein;
InterProG1ZH43 
PFAMG1ZH43 
ProdomG1ZH43 
UniProtKBG5TVN2SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5TVN2 
PFAMG5TVN2 
ProdomG5TVN2 
UniProtKBG5VKN2SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5VKN2 
PFAMG5VKN2 
ProdomG5VKN2 
UniProtKBH4W8E7SubName: Full=Uncharacterized protein;
InterProH4W8E7 
PFAMH4W8E7 
ProdomH4W8E7 
UniProtKBG5X4U6SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5X4U6 
PFAMG5X4U6 
ProdomG5X4U6 
UniProtKBA0A028BNH4SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE24921.1};
InterProA0A028BNH4 
PFAMA0A028BNH4 
ProdomA0A028BNH4 
UniProtKBG5WQC4SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5WQC4 
PFAMG5WQC4 
ProdomG5WQC4 
UniProtKBA0A028E614SubName: Full=Membrane protein {ECO:0000313|EMBL:EZE55274.1};
InterProA0A028E614 
PFAMA0A028E614 
ProdomA0A028E614 
UniProtKBE7UJZ5SubName: Full=Putative uncharacterized protein;
InterProE7UJZ5 
PFAME7UJZ5 
ProdomE7UJZ5 
UniProtKBG5W141SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5W141 
PFAMG5W141 
ProdomG5W141 
UniProtKBB3IQ35SubName: Full=Putative inner membrane protein;
InterProB3IQ35 
PFAMB3IQ35 
ProdomB3IQ35 
UniProtKBA0A069X3H1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU23646.1};
InterProA0A069X3H1 
PFAMA0A069X3H1 
ProdomA0A069X3H1 
UniProtKBA0A079GZM1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY96502.1};
InterProA0A079GZM1 
PFAMA0A079GZM1 
ProdomA0A079GZM1 
UniProtKBE9WQJ7SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE9WQJ7 
PFAME9WQJ7 
ProdomE9WQJ7 
UniProtKBG1Z265SubName: Full=Putative uncharacterized protein;
InterProG1Z265 
PFAMG1Z265 
ProdomG1Z265 
UniProtKBH4UXR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV63031.1};
InterProH4UXR3 
PFAMH4UXR3 
ProdomH4UXR3 
UniProtKBC8TPS8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI24842.1};
InterProC8TPS8 
PFAMC8TPS8 
ProdomC8TPS8 
UniProtKBH1F5U2SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProH1F5U2 
PFAMH1F5U2 
ProdomH1F5U2 
UniProtKBE9WD44SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProE9WD44 
PFAME9WD44 
ProdomE9WD44 
UniProtKBF4NDM8SubName: Full=Putative Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EGJ05528.1};
InterProF4NDM8 
PFAMF4NDM8 
ProdomF4NDM8 
UniProtKBF4SMI4SubName: Full=Threonine-rich inner membrane protein GfcA {ECO:0000313|EMBL:EGI10534.1};
InterProF4SMI4 
PFAMF4SMI4 
ProdomF4SMI4 
UniProtKBF9QWF8SubName: Full=Putative uncharacterized protein;
InterProF9QWF8 
PFAMF9QWF8 
ProdomF9QWF8 
UniProtKBG1Y7G8SubName: Full=Putative uncharacterized protein;
InterProG1Y7G8 
PFAMG1Y7G8 
ProdomG1Y7G8 
UniProtKBG2CHT0SubName: Full=Putative uncharacterized protein;
InterProG2CHT0 
PFAMG2CHT0 
ProdomG2CHT0 
UniProtKBG2F9M7SubName: Full=Putative uncharacterized protein;
InterProG2F9M7 
PFAMG2F9M7 
ProdomG2F9M7 
UniProtKBE0IZ55SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFH10734.1};
InterProE0IZ55 
PFAME0IZ55 
ProdomE0IZ55 
UniProtKBG5XUJ7SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5XUJ7 
PFAMG5XUJ7 
ProdomG5XUJ7 
UniProtKBG5UNR2SubName: Full=Threonine-rich inner membrane protein gfcA;
InterProG5UNR2 
PFAMG5UNR2 
ProdomG5UNR2 
UniProtKBC9QZ89SubName: Full=Putative inner membrane protein;Flags: Precursor;
InterProC9QZ89 
PFAMC9QZ89 
ProdomC9QZ89 
UniProtKBA0A0G2XHY2SubName: Full=Membrane protein {ECO:0000313|EMBL:AKI67173.1};
InterProA0A0G2XHY2 
PFAMA0A0G2XHY2 
ProdomA0A0G2XHY2 
UniProtKBA0A0A8UBR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK04207.1};
InterProA0A0A8UBR3 
PFAMA0A0A8UBR3 
ProdomA0A0A8UBR3 
UniProtKBB3XEW2SubName: Full=Putative inner membrane protein;
InterProB3XEW2 
PFAMB3XEW2 
ProdomB3XEW2 
UniProtKBH5BN84SubName: Full=Uncharacterized protein;
InterProH5BN84 
PFAMH5BN84 
ProdomH5BN84 
UniProtKBC5W2T4SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:ACT29629.1};
InterProC5W2T4 
PFAMC5W2T4 
ProdomC5W2T4 
UniProtKBH4ZAX2SubName: Full=Uncharacterized protein;
InterProH4ZAX2 
PFAMH4ZAX2 
ProdomH4ZAX2 
UniProtKBA0A069YWG4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU49260.1};
InterProA0A069YWG4 
PFAMA0A069YWG4 
ProdomA0A069YWG4 
UniProtKBA0A070FQA0SubName: Full=Membrane protein {ECO:0000313|EMBL:KDV64649.1};
InterProA0A070FQA0 
PFAMA0A070FQA0 
ProdomA0A070FQA0 
UniProtKBA0A071D6N1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ37059.1};
InterProA0A071D6N1 
PFAMA0A071D6N1 
ProdomA0A071D6N1 
UniProtKBA0A073VT66SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL83301.1};
InterProA0A073VT66 
PFAMA0A073VT66 
ProdomA0A073VT66 
UniProtKBA0A080FA71SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN58680.1};
InterProA0A080FA71 
PFAMA0A080FA71 
ProdomA0A080FA71 
UniProtKBH4VU98SubName: Full=Uncharacterized protein;
InterProH4VU98 
PFAMH4VU98 
ProdomH4VU98