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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 405953
Original Database ID GI 405953
Organism Escherichia coli, Escherichia coli 53638, etc.
Annotation yeec
Sequence Length 347

Dataset Information:

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Model Information

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Target Region1-334
Protein Length347
Template PDB Code3mzfA
Template Region23-356
Sequence Identity50%
E-Value0
GA3411
MPQS1.64194
z-DOPE-0.86
TSVMod MethodMSALL
TSVMod RMSD2.734
TSVMod NO350.889
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3mzf
DBALI3mzfA 
JenaImageLibrary3mzf 
Target Sequence
UniProtKBM9L305SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:EMX86393.1};EC=3.4.16.4 {ECO:0000313|EMBL:EMX86393.1};
InterProM9L305 
PFAMM9L305 
ProdomM9L305 
UniProtKBN2I1Y3SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD;EC=3.4.16.4;
InterProN2I1Y3 
PFAMN2I1Y3 
ProdomN2I1Y3 
UniProtKBN2Y2T8SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD;EC=3.4.16.4;
InterProN2Y2T8 
PFAMN2Y2T8 
ProdomN2Y2T8 
UniProtKBN3FIM3SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:ENC91376.1};EC=3.4.16.4 {ECO:0000313|EMBL:ENC91376.1};
InterProN3FIM3 
PFAMN3FIM3 
ProdomN3FIM3 
UniProtKBD8B2K7SubName: Full=D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:EFJ66680.1};EC=3.4.16.4 {ECO:0000313|EMBL:EFJ66680.1};
InterProD8B2K7 
PFAMD8B2K7 
ProdomD8B2K7 
UniProtKBH4VY23SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD;EC=3.4.16.4;
InterProH4VY23 
PFAMH4VY23 
ProdomH4VY23 
UniProtKBD7X810SubName: Full=D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:EFJ73582.1};EC=3.4.16.4 {ECO:0000313|EMBL:EFJ73582.1};
InterProD7X810 
PFAMD7X810 
ProdomD7X810 
UniProtKBN4NLF7SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:ENG96930.1};EC=3.4.16.4 {ECO:0000313|EMBL:ENG96930.1};
InterProN4NLF7 
PFAMN4NLF7 
ProdomN4NLF7 
UniProtKBA0A0A0H478SubName: Full=D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:KGM70133.1};EC=3.4.16.4 {ECO:0000313|EMBL:KGM70133.1};SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:
InterProA0A0A0H478 
PFAMA0A0A0H478 
ProdomA0A0A0H478 
UniProtKBA0A079FMK2SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:KDY60219.1};EC=3.4.16.4 {ECO:0000313|EMBL:KDY60219.1};
InterProA0A079FMK2 
PFAMA0A079FMK2 
ProdomA0A079FMK2 
UniProtKBA0A079F3H4SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:KDY51279.1};EC=3.4.16.4 {ECO:0000313|EMBL:KDY51279.1};
InterProA0A079F3H4 
PFAMA0A079F3H4 
ProdomA0A079F3H4 
UniProtKBN4PEC9SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:ENH08827.1};EC=3.4.16.4 {ECO:0000313|EMBL:ENH08827.1};
InterProN4PEC9 
PFAMN4PEC9 
ProdomN4PEC9 
UniProtKBV0SX21SubName: Full=D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:ESD11149.1};
InterProV0SX21 
PFAMV0SX21 
ProdomV0SX21 
UniProtKBV0XLZ9SubName: Full=D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:ESD68509.1};
InterProV0XLZ9 
PFAMV0XLZ9 
ProdomV0XLZ9 
UniProtKBH5QVJ9SubName: Full=DD-carboxypeptidase, penicillin-binding protein 6b;EC=3.4.16.4;
InterProH5QVJ9 
PFAMH5QVJ9 
ProdomH5QVJ9 
UniProtKBH4UKX7SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD {ECO:0000313|EMBL:EHV57842.1};EC=3.4.16.4 {ECO:0000313|EMBL:EHV57842.1};
InterProH4UKX7 
PFAMH4UKX7 
ProdomH4UKX7 
UniProtKBH4VY23SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD;EC=3.4.16.4;
InterProH4VY23 
PFAMH4VY23 
ProdomH4VY23 
UniProtKBH5QVJ9SubName: Full=DD-carboxypeptidase, penicillin-binding protein 6b;EC=3.4.16.4;
InterProH5QVJ9 
PFAMH5QVJ9 
ProdomH5QVJ9 
UniProtKBD8B2K7SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase;
InterProD8B2K7 
PFAMD8B2K7 
ProdomD8B2K7 
UniProtKBD7X810SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase;
InterProD7X810 
PFAMD7X810 
ProdomD7X810 
UniProtKBH4UKX7SubName: Full=D-alanyl-D-alanine carboxypeptidase dacD;EC=3.4.16.4;
InterProH4UKX7 
PFAMH4UKX7 
ProdomH4UKX7 
RefSeqZP_00736382.1 COG1686: D-alanyl-D-alanine carboxypeptidase [Escherichia coli 53638]
RefSeqZP_07116943.1 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 198-1]
RefSeqZP_07168579.1 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 175-1]
GenPept300357712 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 198-1]
GenPept300898616 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 198-1]
GenPept300956273 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 175-1]
GenPept405953yeeC
GenPept75514052 COG1686: D-alanyl-D-alanine carboxypeptidase [Escherichia coli 53638]
GenPept300316896 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 175-1]
GenBankAAA16416.1 yeeC [Escherichia coli]
GenBankEFJ66680.1 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 175-1]
GenBankEFJ73582.1 serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 198-1]