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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P75919
Original Database ID TR YMDC_ECOLI
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation uncharacterized protein ymdc
Sequence Length 493

Dataset Information:

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Model Information

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Target Region5-456
Protein Length493
Template PDB Code1v0wA
Template Region26-512
Sequence Identity15%
E-Value3e-57
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1v0wphospholipase d from streptomyces sp. strain pmf soaked with the substrate dibutyrylphosphatidylcholine.
DBALI1v0wA 
CATH3.30.870.10 Domain: 1v0wA01 Endonuclease Chain A (100%)
CATH3.30.870.10 Domain: 1v0wA02 Endonuclease Chain A (99%)
JenaImageLibrary1v0w 
Target Sequence
UniProtKBL5I8E9SubName: Full=Hydrolase;
InterProL5I8E9 
PFAML5I8E9 
ProdomL5I8E9 
UniProtKBL1WED6SubName: Full=Hydrolase;
InterProL1WED6 
PFAML1WED6 
ProdomL1WED6 
UniProtKBL1X8M4SubName: Full=Hydrolase;
InterProL1X8M4 
PFAML1X8M4 
ProdomL1X8M4 
UniProtKBL1XNP3SubName: Full=Hydrolase;
InterProL1XNP3 
PFAML1XNP3 
ProdomL1XNP3 
UniProtKBL1YGA5SubName: Full=Hydrolase;
InterProL1YGA5 
PFAML1YGA5 
ProdomL1YGA5 
UniProtKBL1YKW3SubName: Full=Hydrolase;
InterProL1YKW3 
PFAML1YKW3 
ProdomL1YKW3 
UniProtKBL1YWP9SubName: Full=Hydrolase;
InterProL1YWP9 
PFAML1YWP9 
ProdomL1YWP9 
UniProtKBF4SFW7RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProF4SFW7 
PFAMF4SFW7 
ProdomF4SFW7 
UniProtKBJ7Q6Z1RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProJ7Q6Z1 
PFAMJ7Q6Z1 
ProdomJ7Q6Z1 
UniProtKBL2B611SubName: Full=Hydrolase;
InterProL2B611 
PFAML2B611 
ProdomL2B611 
UniProtKBB6I9C3RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProB6I9C3 
PFAMB6I9C3 
ProdomB6I9C3 
UniProtKBL1VRL4SubName: Full=Hydrolase;
InterProL1VRL4 
PFAML1VRL4 
ProdomL1VRL4 
UniProtKBJ7QKH9RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProJ7QKH9 
PFAMJ7QKH9 
ProdomJ7QKH9 
UniProtKBS1I975RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProS1I975 
PFAMS1I975 
ProdomS1I975 
UniProtKBM7USM4SubName: Full=Putative hydrolase;
InterProM7USM4 
PFAMM7USM4 
ProdomM7USM4 
UniProtKBM7VL97SubName: Full=Putative hydrolase;
InterProM7VL97 
PFAMM7VL97 
ProdomM7VL97 
UniProtKBM7W274SubName: Full=Putative hydrolase;
InterProM7W274 
PFAMM7W274 
ProdomM7W274 
UniProtKBS0UEJ1SubName: Full=Synthase;
InterProS0UEJ1 
PFAMS0UEJ1 
ProdomS0UEJ1 
UniProtKBS0W681RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProS0W681 
PFAMS0W681 
ProdomS0W681 
UniProtKBS0Y8E6SubName: Full=Synthase;
InterProS0Y8E6 
PFAMS0Y8E6 
ProdomS0Y8E6 
UniProtKBS1AQS5SubName: Full=Synthase;
InterProS1AQS5 
PFAMS1AQS5 
ProdomS1AQS5 
UniProtKBS1BHX9SubName: Full=Synthase;
InterProS1BHX9 
PFAMS1BHX9 
ProdomS1BHX9 
UniProtKBS1EPP3RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProS1EPP3 
PFAMS1EPP3 
ProdomS1EPP3 
UniProtKBS1ET89SubName: Full=Synthase;
InterProS1ET89 
PFAMS1ET89 
ProdomS1ET89 
UniProtKBL2BGR3SubName: Full=Hydrolase;
InterProL2BGR3 
PFAML2BGR3 
ProdomL2BGR3 
UniProtKBL2C287SubName: Full=Hydrolase;
InterProL2C287 
PFAML2C287 
ProdomL2C287 
UniProtKBL3ZYV3SubName: Full=Hydrolase;
InterProL3ZYV3 
PFAML3ZYV3 
ProdomL3ZYV3 
UniProtKBE9XXM9SubName: Full=Phospholipase D;
InterProE9XXM9 
PFAME9XXM9 
ProdomE9XXM9 
UniProtKBL4FHW0SubName: Full=Hydrolase;
InterProL4FHW0 
PFAML4FHW0 
ProdomL4FHW0 
UniProtKBE9YAR9RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProE9YAR9 
PFAME9YAR9 
ProdomE9YAR9 
UniProtKBF4TCV3RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProF4TCV3 
PFAMF4TCV3 
ProdomF4TCV3 
UniProtKBL4PIP9SubName: Full=Hydrolase;
InterProL4PIP9 
PFAML4PIP9 
ProdomL4PIP9 
UniProtKBG5TAS3SubName: Full=Putative uncharacterized protein;
InterProG5TAS3 
PFAMG5TAS3 
ProdomG5TAS3 
UniProtKBL1W3X0SubName: Full=Hydrolase;
InterProL1W3X0 
PFAML1W3X0 
ProdomL1W3X0 
UniProtKBL5CUY6SubName: Full=Hydrolase;
InterProL5CUY6 
PFAML5CUY6 
ProdomL5CUY6 
UniProtKBF4NDG5RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProF4NDG5 
PFAMF4NDG5 
ProdomF4NDG5 
UniProtKBE9WRH6SubName: Full=Phospholipase D;
InterProE9WRH6 
PFAME9WRH6 
ProdomE9WRH6 
UniProtKBL3VY59SubName: Full=Hydrolase;
InterProL3VY59 
PFAML3VY59 
ProdomL3VY59 
UniProtKBL3VGW6SubName: Full=Hydrolase;
InterProL3VGW6 
PFAML3VGW6 
ProdomL3VGW6 
UniProtKBC6EHG6RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProC6EHG6 
PFAMC6EHG6 
ProdomC6EHG6 
UniProtKBL2D7N9SubName: Full=Hydrolase;
InterProL2D7N9 
PFAML2D7N9 
ProdomL2D7N9 
UniProtKBC9QYR4SubName: Full=Phospholipase D/Transphosphatidylase;
InterProC9QYR4 
PFAMC9QYR4 
ProdomC9QYR4 
UniProtKBL3EEU6SubName: Full=Hydrolase;
InterProL3EEU6 
PFAML3EEU6 
ProdomL3EEU6 
UniProtKBD6I5Y1RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProD6I5Y1 
PFAMD6I5Y1 
ProdomD6I5Y1 
UniProtKBL3KV10RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProL3KV10 
PFAML3KV10 
ProdomL3KV10 
UniProtKBD6J904RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProD6J904 
PFAMD6J904 
ProdomD6J904 
UniProtKBE0IVJ0SubName: Full=Phospholipase D;SubName: Full=Phospholipase D/Transphosphatidylase;
InterProE0IVJ0 
PFAME0IVJ0 
ProdomE0IVJ0 
UniProtKBL3TW63SubName: Full=Hydrolase;
InterProL3TW63 
PFAML3TW63 
ProdomL3TW63 
UniProtKBE8Y1Y7RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProE8Y1Y7 
PFAME8Y1Y7 
ProdomE8Y1Y7 
UniProtKBL5GDG0SubName: Full=Hydrolase;
InterProL5GDG0 
PFAML5GDG0 
ProdomL5GDG0 
UniProtKBG5TI76SubName: Full=Putative uncharacterized protein;
InterProG5TI76 
PFAMG5TI76 
ProdomG5TI76 
UniProtKBI2R467SubName: Full=Uncharacterized protein;
InterProI2R467 
PFAMI2R467 
ProdomI2R467 
UniProtKBG5TW08SubName: Full=Putative uncharacterized protein;
InterProG5TW08 
PFAMG5TW08 
ProdomG5TW08 
UniProtKBL1ZPF4SubName: Full=Hydrolase;
InterProL1ZPF4 
PFAML1ZPF4 
ProdomL1ZPF4 
UniProtKBL3LJS0SubName: Full=Hydrolase;
InterProL3LJS0 
PFAML3LJS0 
ProdomL3LJS0 
UniProtKBG5W1Z0SubName: Full=Putative uncharacterized protein;
InterProG5W1Z0 
PFAMG5W1Z0 
ProdomG5W1Z0 
UniProtKBG5W463SubName: Full=Putative uncharacterized protein;
InterProG5W463 
PFAMG5W463 
ProdomG5W463 
UniProtKBL4B0J6SubName: Full=Hydrolase;
InterProL4B0J6 
PFAML4B0J6 
ProdomL4B0J6 
UniProtKBL2DL81SubName: Full=Hydrolase;
InterProL2DL81 
PFAML2DL81 
ProdomL2DL81 
UniProtKBL4P711SubName: Full=Hydrolase;
InterProL4P711 
PFAML4P711 
ProdomL4P711 
UniProtKBG5XV59SubName: Full=Putative uncharacterized protein;
InterProG5XV59 
PFAMG5XV59 
ProdomG5XV59 
UniProtKBS1D492SubName: Full=Synthase;
InterProS1D492 
PFAMS1D492 
ProdomS1D492 
UniProtKBL4JT32SubName: Full=Hydrolase;
InterProL4JT32 
PFAML4JT32 
ProdomL4JT32 
UniProtKBL4N1N8SubName: Full=Hydrolase;
InterProL4N1N8 
PFAML4N1N8 
ProdomL4N1N8 
UniProtKBG5UPB5SubName: Full=Putative uncharacterized protein;
InterProG5UPB5 
PFAMG5UPB5 
ProdomG5UPB5 
UniProtKBG5XQ34SubName: Full=Putative uncharacterized protein;
InterProG5XQ34 
PFAMG5XQ34 
ProdomG5XQ34 
UniProtKBL1YZW4SubName: Full=Hydrolase;
InterProL1YZW4 
PFAML1YZW4 
ProdomL1YZW4 
UniProtKBG5WRI8SubName: Full=Putative uncharacterized protein;
InterProG5WRI8 
PFAMG5WRI8 
ProdomG5WRI8 
UniProtKBM7VV24SubName: Full=Putative hydrolase;
InterProM7VV24 
PFAMM7VV24 
ProdomM7VV24 
UniProtKBH9UTR6RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProH9UTR6 
PFAMH9UTR6 
ProdomH9UTR6 
UniProtKBL1XKD5SubName: Full=Hydrolase;
InterProL1XKD5 
PFAML1XKD5 
ProdomL1XKD5 
UniProtKBG5VM14SubName: Full=Putative uncharacterized protein;
InterProG5VM14 
PFAMG5VM14 
ProdomG5VM14 
UniProtKBL3UMN2SubName: Full=Hydrolase;
InterProL3UMN2 
PFAML3UMN2 
ProdomL3UMN2 
UniProtKBG5X646SubName: Full=Putative uncharacterized protein;
InterProG5X646 
PFAMG5X646 
ProdomG5X646 
UniProtKBG5YF15SubName: Full=Putative uncharacterized protein;
InterProG5YF15 
PFAMG5YF15 
ProdomG5YF15 
UniProtKBH1E319SubName: Full=Putative uncharacterized protein;
InterProH1E319 
PFAMH1E319 
ProdomH1E319 
UniProtKBS0ZMF9SubName: Full=Synthase;
InterProS0ZMF9 
PFAMS0ZMF9 
ProdomS0ZMF9 
UniProtKBL2DSX5SubName: Full=Hydrolase;
InterProL2DSX5 
PFAML2DSX5 
ProdomL2DSX5 
UniProtKBL3EZ81SubName: Full=Hydrolase;
InterProL3EZ81 
PFAML3EZ81 
ProdomL3EZ81 
UniProtKBL3QYX2SubName: Full=Hydrolase;
InterProL3QYX2 
PFAML3QYX2 
ProdomL3QYX2 
UniProtKBL3RLA3SubName: Full=Hydrolase;
InterProL3RLA3 
PFAML3RLA3 
ProdomL3RLA3 
UniProtKBL3UY64SubName: Full=Hydrolase;
InterProL3UY64 
PFAML3UY64 
ProdomL3UY64 
UniProtKBL3X0X1SubName: Full=Hydrolase;
InterProL3X0X1 
PFAML3X0X1 
ProdomL3X0X1 
UniProtKBL4BZ23SubName: Full=Hydrolase;
InterProL4BZ23 
PFAML4BZ23 
ProdomL4BZ23 
UniProtKBL4FIQ2SubName: Full=Hydrolase;
InterProL4FIQ2 
PFAML4FIQ2 
ProdomL4FIQ2 
UniProtKBL4WTP8SubName: Full=Hydrolase;
InterProL4WTP8 
PFAML4WTP8 
ProdomL4WTP8 
UniProtKBL4ZZI7SubName: Full=Hydrolase;
InterProL4ZZI7 
PFAML4ZZI7 
ProdomL4ZZI7 
UniProtKBL2CVR6SubName: Full=Hydrolase;
InterProL2CVR6 
PFAML2CVR6 
ProdomL2CVR6 
UniProtKBL5DQK1SubName: Full=Hydrolase;
InterProL5DQK1 
PFAML5DQK1 
ProdomL5DQK1 
UniProtKBL2B9W9SubName: Full=Hydrolase;
InterProL2B9W9 
PFAML2B9W9 
ProdomL2B9W9 
UniProtKBI2PNI1SubName: Full=Uncharacterized protein;
InterProI2PNI1 
PFAMI2PNI1 
ProdomI2PNI1 
UniProtKBS1CAV0SubName: Full=Synthase;
InterProS1CAV0 
PFAMS1CAV0 
ProdomS1CAV0 
UniProtKBL4H9H6SubName: Full=Hydrolase;
InterProL4H9H6 
PFAML4H9H6 
ProdomL4H9H6 
UniProtKBI4J968RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProI4J968 
PFAMI4J968 
ProdomI4J968 
UniProtKBL2A4J1SubName: Full=Hydrolase;
InterProL2A4J1 
PFAML2A4J1 
ProdomL2A4J1 
UniProtKBG5U6K6SubName: Full=Putative uncharacterized protein;
InterProG5U6K6 
PFAMG5U6K6 
ProdomG5U6K6 
UniProtKBA0A0G3HV99RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProA0A0G3HV99 
PFAMA0A0G3HV99 
ProdomA0A0G3HV99 
UniProtKBA0A0H3ET04RecName: Full=Cardiolipin synthase C {ECO:0000256|HAMAP-Rule:MF_01918};Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01918};EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01918};
InterProA0A0H3ET04 
PFAMA0A0H3ET04 
ProdomA0A0H3ET04 
UniProtKBL1ZT99SubName: Full=Hydrolase;
InterProL1ZT99 
PFAML1ZT99 
ProdomL1ZT99 
UniProtKBL2AT44SubName: Full=Hydrolase;
InterProL2AT44 
PFAML2AT44 
ProdomL2AT44