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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 53971865
Original Database ID TR VIME_HUMAN
Organism Homo sapiens
Annotation sequence 877 from patent us 6753314
Sequence Length 465

Dataset Information:

The newest dataset for this sequence was created on 2005-03-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region92-385
Protein Length465
Template PDB Code1f5nA
Template Region241-552
Sequence Identity10%
E-Value6e-08
GA3410.01
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1f5nhuman guanylate binding protein-1 in complex with the gtp analogue, gmppnp. ; PFAM: PF02263 PF02841 ; SCOP: 19077 32152
DBALI1f5nA 
CATH1.20.1000.10 Domain: 1f5nA01 Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 3 (91%)
JenaImageLibrary1f5n 
Target Sequence
UniProtKBP08670Vimentin
InterProP08670 
PFAMP08670 
ProdomP08670 
GenPept53971865Sequence 877 from patent US 6753314