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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 53971865
Original Database ID TR VIME_HUMAN
Organism Homo sapiens
Annotation sequence 877 from patent us 6753314
Sequence Length 465

Dataset Information:

The newest dataset for this sequence was created on 2005-03-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region327-405
Protein Length465
Template PDB Code1gk4A
Template Region328-406
Sequence Identity100%
E-Value5e-19
GA3410.96
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1gk4human vimentin coil 2b fragment (cys2) ; PFAM: PF00038 ; SCOP: 70203
DBALI1gk4A 
CATH1.20.5.170 Domain: 1gk4A00 Single alpha-helices involved in coiled-coils or other helix-helix interfaces (100%)
JenaImageLibrary1gk4 
Target Sequence
UniProtKBP08670Vimentin
InterProP08670 
PFAMP08670 
ProdomP08670 
GenPept53971865Sequence 877 from patent US 6753314