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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 281038074
Original Database ID SN P08670_chr10:1731143
Organism Homo sapiens
Annotation sequence 2231 from patent us 7608413
Sequence Length 465

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region91-411
Protein Length465
Template PDB Code1m1jB
Template Region87-401
Sequence Identity12%
E-Value2e-34
GA3410
Datasetsnp-human3
ModPipe VersionModPipe1.0
Model Date2005-10-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1m1jcrystal structure of native chicken fibrinogen with two different bound ligands
DBALI1m1jB 
CATH3.90.215.10 Domain: 1m1jB01 Gamma Fibrinogen, chain A, domain 1 (60%)
CATH4.10.530.10 Domain: 1m1jB02 Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2 (48%)
CATH1.20.5.50 Domain: 1m1jB03 Single alpha-helices involved in coiled-coils or other helix-helix interfaces (83%)
JenaImageLibrary1m1j 
Target Sequence
UniProtKBP08670Vimentin
InterProP08670 
PFAMP08670 
ProdomP08670 
GenPept281038074Sequence 2231 from patent US 7608413
GenPept314880298Sequence 540 from patent US 7842467
GenPept331631305Sequence 1475 from patent US 7919467
GenPept344969425Sequence 2231 from patent US 7998689