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Sequence Information

Primary Database Link B0YJC2
Original Database ID NP_003371.2 vi
Organism Gorilla gorilla gorilla, Pan paniscus, etc.
Annotation subname: full=vimentin variant
1 (vimentin variant 2);
Sequence Length 466

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region146-249
Protein Length466
Template PDB Code3uf1A
Template Region146-249
Sequence Identity100%
E-Value0
GA3411
MPQS1.35048
z-DOPE-0.46
TSVMod MethodMSALL
TSVMod RMSD4.847
TSVMod NO350.802
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3uf1
DBALI3uf1A 
JenaImageLibrary3uf1 
Target Sequence
UniProtKBQ8N850RecName: Full=Vimentin;
InterProQ8N850 
PFAMQ8N850 
ProdomQ8N850 
UniProtKBQ96ML2RecName: Full=Vimentin;
InterProQ96ML2 
PFAMQ96ML2 
ProdomQ96ML2 
UniProtKBG2HJ38SubName: Full=Vimentin {ECO:0000313|EMBL:BAK63746.1, ECO:0000313|Ensembl:ENSPTRP00000003945};
InterProG2HJ38 
PFAMG2HJ38 
ProdomG2HJ38 
UniProtKBQ9NTM3RecName: Full=Vimentin;
InterProQ9NTM3 
PFAMQ9NTM3 
ProdomQ9NTM3 
UniProtKBV9HWE1SubName: Full=Epididymis luminal protein 113 {ECO:0000313|EMBL:ACJ13726.1};
InterProV9HWE1 
PFAMV9HWE1 
ProdomV9HWE1 
UniProtKBQ548L2CTCL tumor antigen HD-CL-06 (Vimentin, isoform CRA_a) (cDNA FLJ76120,highly similar to Homo sapiens vimentin (VIM), mRNA) (Vimentinvariant).
InterProQ548L2 
PFAMQ548L2 
ProdomQ548L2 
UniProtKBA0A2R9BXN0Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A2R9BXN0 
PFAMA0A2R9BXN0 
ProdomA0A2R9BXN0 
UniProtKBA0A6D2XL15Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A6D2XL15 
PFAMA0A6D2XL15 
ProdomA0A6D2XL15 
UniProtKBG2HJ38SubName: Full=Vimentin;
InterProG2HJ38 
PFAMG2HJ38 
ProdomG2HJ38 
UniProtKBA0A8I5TLL4Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A8I5TLL4 
PFAMA0A8I5TLL4 
ProdomA0A8I5TLL4 
UniProtKBD3DRU4SubName: Full=Vimentin, isoform CRA_a;
InterProD3DRU4 
PFAMD3DRU4 
ProdomD3DRU4 
UniProtKBQ9NTM3BA124N14.1 (vimentin)
InterProQ9NTM3 
PFAMQ9NTM3 
ProdomQ9NTM3 
UniProtKBB0YJC2SubName: Full=Vimentin variant 1 (Vimentin variant 2);
InterProB0YJC2 
PFAMB0YJC2 
ProdomB0YJC2 
UniProtKBA0A2J8K633Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A2J8K633 
PFAMA0A2J8K633 
ProdomA0A2J8K633 
UniProtKBA0A2J8VKT8Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A2J8VKT8 
PFAMA0A2J8VKT8 
ProdomA0A2J8VKT8 
UniProtKBA0A6B0SE70Vimentin {ECO:0000256|ARBA:ARBA00014147}
InterProA0A6B0SE70 
PFAMA0A6B0SE70 
ProdomA0A6B0SE70 
UniProtKBP08670Vimentin.
InterProP08670 
PFAMP08670 
ProdomP08670 
UniProtKBQ15867Vimentin.
InterProQ15867 
PFAMQ15867 
ProdomQ15867 
UniProtKBQ15868Vimentin.
InterProQ15868 
PFAMQ15868 
ProdomQ15868 
UniProtKBQ15869Vimentin.
InterProQ15869 
PFAMQ15869 
ProdomQ15869 
UniProtKBQ6LER9Vimentin.
InterProQ6LER9 
PFAMQ6LER9 
ProdomQ6LER9 
UniProtKBQ8N850RecName: Full=Vimentin;
InterProQ8N850 
PFAMQ8N850 
ProdomQ8N850 
UniProtKBQ96ML2RecName: Full=Vimentin;
InterProQ96ML2 
PFAMQ96ML2 
ProdomQ96ML2 
UniProtKBQ9NTM3RecName: Full=Vimentin;
InterProQ9NTM3 
PFAMQ9NTM3 
ProdomQ9NTM3 
UniProtKBP08670.4VIME_HUMAN RecName: Full=Vimentin
InterProP08670.4 
PFAMP08670.4 
ProdomP08670.4 
RefSeqNP_003371.2 vimentin [Homo sapiens]
RefSeqXP_032020652.1vimentin
RefSeqXP_024109584.1vimentin
RefSeqXP_030675100.1vimentin
GenPept7576229vimentin
GenPept915750395Sequence 1 from patent US 8999921
GenPept938396286unnamed protein product
GenPept55977767VIME_HUMAN RecName: Full=Vimentin
GenPept2119204A25074 vimentin - human
GenPept649104053VIM, partial
GenPept62896763vimentin variant, partial
GenPept119606621vimentin, isoform CRA_a
GenPept223619735Sequence 499 from patent US 7485414
GenPept22854562CTCL tumor antigen HD-CL-06
GenPept27291249Sequence 12 from patent US 6476193
GenPept281038075Sequence 2232 from patent US 7608413
GenPept281038076Sequence 2233 from patent US 7608413
GenPept307685975vimentin, partial
GenPept314264597Sequence 188 from patent US 7763425
GenPept314880299Sequence 541 from patent US 7842467
GenPept217115828Sequence 499 from patent US 7419779
GenPept211948009epididymis luminal protein 113
GenPept119606622vimentin, isoform CRA_a
GenPept13111801Vimentin
GenPept14742600 vimentin [Homo sapiens]
GenPept14742608 vimentin [Homo sapiens]
GenPept158254718unnamed protein product
GenPept167887749vimentin variant 1
GenPept167887750vimentin variant 2
GenPept21040384Vimentin
GenPept149846002intermediate filament protein
GenPept314880300Sequence 542 from patent US 7842467
GenPept62896573vimentin variant, partial
GenPept343959778vimentin
GenPept344969426Sequence 2232 from patent US 7998689
GenPept344969427Sequence 2233 from patent US 7998689
GenPept37850unnamed protein product
GenPept437016440Sequence 63 from patent US 8288091
GenPept331631306Sequence 1476 from patent US 7919467
GenPept44890587Vimentin
GenPept294597732Sequence 1 from patent US 7691582
GenPept534411926Sequence 1 from patent US 8519096
GenPept568529477Sequence 6663 from patent US 8586006
GenPept62414289 vimentin [Homo sapiens]
GenBankAAH00163.2 Vimentin [Homo sapiens]
GenBankAAH30573.1 Vimentin [Homo sapiens]
GenBankEAW86216.1 vimentin, isoform CRA_a [Homo sapiens]
GenBankEAW86215.1 vimentin, isoform CRA_a [Homo sapiens]
GenBankACA06102.1 vimentin variant 2 [Homo sapiens]
GenBankACA06101.1 vimentin variant 1 [Homo sapiens]
GenBankAAN09720.1 CTCL tumor antigen HD-CL-06 [Homo sapiens]
GenBankAAH66956.1 Vimentin [Homo sapiens]
ENSEMBLENSP00000349623Vimentin. [Homo sapiens]
ENSEMBLENSP00000224237Vimentin. [Homo sapiens]
EMBLCAA79613.2 
EMBLCAA39600.1 
EMBLCAB87963.1 
ENSEMBLENSP00000224237 
ENSEMBLENSP00000349623 
ENSEMBLENSP00000349623TDI sequence
ENSEMBLENSP00000224237 
UCSCGenomeBrowserP08670