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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 225734128
Original Database ID GI 225734128
Organism
Annotation a chain a, ampc k67r mutant complexed
with benzo(b)thiophene-2-boronic
acid (bzb )
Sequence Length 358

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-358
Protein Length358
Template PDB Code2ffyA
Template Region4-361
Sequence Identity99%
E-Value0
GA3411
MPQS2.2928
z-DOPE-2.15
TSVMod MethodMTALL
TSVMod RMSD1.059
TSVMod NO350.966
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2ffyampc beta-lactamase n289a mutant in complex with a boronic acid deacylation transition state analog compound sm3
DBALI2ffyA 
CATH3.40.710.10 Domain: 2ffyA00 DD-peptidase/beta-lactamase superfamily (100%)
JenaImageLibrary2ffy 
Target Sequence
PDB3FKWBChain B, Ampc K67r Mutant Apo Structure
PDB3FKWAChain A, Ampc K67r Mutant Apo Structure
PDB3FKWB Chain B, Ampc K67r Mutant Apo Structure
PDB3FKVBChain B, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb)
PDB3FKVAChain A, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb)
PDB3FKVB Chain B, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb)
GenPept225734131B Chain B, Ampc K67r Mutant Apo Structure
GenPept225734130A Chain A, Ampc K67r Mutant Apo Structure
GenPept225734129B Chain B, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb)
GenPept225734128A Chain A, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb)