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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 53971846
Original Database ID UP K2C8_HUMAN
Organism Homo sapiens
Annotation sequence 858 from patent us 6753314
Sequence Length 482

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region60-404
Protein Length482
Template PDB Code1m1jB
Template Region68-403
Sequence Identity12%
E-Value1e-39
GA3410
Datasetsnp-human3
ModPipe VersionModPipe1.0
Model Date2005-10-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1m1jcrystal structure of native chicken fibrinogen with two different bound ligands
DBALI1m1jB 
CATH3.90.215.10 Domain: 1m1jB01 Gamma Fibrinogen, chain A, domain 1 (62%)
CATH4.10.530.10 Domain: 1m1jB02 Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2 (51%)
CATH1.20.5.50 Domain: 1m1jB03 Single alpha-helices involved in coiled-coils or other helix-helix interfaces (97%)
JenaImageLibrary1m1j 
Target Sequence
UniProtKBP05787Keratin, type II cytoskeletal 8 (Cytokeratin-8) (CK-8) (Keraton-8)DE (K8)
InterProP05787 
PFAMP05787 
ProdomP05787 
GenPept53971846Sequence 858 from patent US 6753314