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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 21504339
Original Database ID gi 224567
Organism Homo sapiens, Bos taurus
Annotation sequence 17 from patent us 6369203
Sequence Length 129

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-129
Protein Length129
Template PDB Code1kx5C
Template Region1-128
Sequence Identity95%
E-Value2e-47
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1kx5x-ray structure of the nucleosome core particle, ncp147, at 1.9 a resolution ; PFAM: PF00125 ; SCOP: 77595
DBALI1kx5C 
CATH1.10.20.10 Domain: 1kx5C00 Histone, subunit A (100%)
JenaImageLibrary1kx5 
Target Sequence
UniProtKBP0C0S9Histone H2A type 1 (H2A.1b)
InterProP0C0S9 
PFAMP0C0S9 
ProdomP0C0S9 
UniProtKBP0C0S8Histone H2A type 1 (H2A.1)
InterProP0C0S8 
PFAMP0C0S8 
ProdomP0C0S8 
UniProtKBP02261Histone H2A.c/d/i/n/p (H2A.1) (H2A/c) (H2A/d) (H2A/i) (H2A/n) (H2A/p)DE (H2A.1b)
InterProP02261 
PFAMP02261 
ProdomP02261 
1109175A1109175A homeostatic thymus hormone alpha
PDB6X5AGHistone H2A type 1
PDB7JOAGHistone H2A type 1
PDB7JOACHistone H2A type 1
PDB7JO9GHistone H2A type 1
PDB7JO9CHistone H2A type 1
PDB6XJDGHistone H2A type 1
PDB6XJDCHistone H2A type 1
PDB6FMLOHistone H2A type 1
PDB6X5ACHistone H2A type 1
PDB6X59GHistone H2A type 1
PDB6X59CHistone H2A type 1
PDB6FMLSHistone H2A type 1
GenPept21504339Sequence 17 from patent US 6369203
GenPept2245671109175A homeostatic thymus hormone alpha
GenPept915840271Sequence 15 from patent US 9012166
GenPept53971824Sequence 836 from patent US 6753314
GenPept3080460histone H2A.1
GenPept70684HSBO2A histone H2A - bovine
GenPept3080465histone H2A.1