University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P33195
Original Database ID TR GCSP_ECOLI
Organism Escherichia coli
Annotation glycine dehydrogenase [decarboxylating]
(ec 1.4.4.2) (glycinede decarboxylase)
(glycine cleavage system p-protein)
Sequence Length 956

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region423-881
Protein Length956
Template PDB Code1js3A
Template Region1-474
Sequence Identity12%
E-Value5e-46
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1js3crystal structure of dopa decarboxylase in complex with the inhibitor carbidopa ; EC: 4.1.1.28 ; PFAM: PF00282 ; SCOP: 67215
DBALI1js3A 
CATH1.20.1340.10 Domain: 1js3A01 dopa decarboxylase, N-terminal domain (100%)
CATH3.40.640.10 Domain: 1js3A02 Type I PLP-dependent aspartate aminotransferase-like (Major domain) (100%)
CATH3.90.1150.10 Domain: 1js3A03 Aspartate Aminotransferase, domain 1 (98%)
JenaImageLibrary1js3 
Target Sequence
UniProtKBP33195Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2) (GlycineDE decarboxylase) (Glycine cleavage system P-protein)
InterProP33195 
PFAMP33195 
ProdomP33195