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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P39314
Original Database ID
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation recname: full=inner membrane protein
ytff;
Sequence Length 324

Dataset Information:

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Model Information

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Target Region43-277
Protein Length324
Template PDB Code2jafA
Template Region39-254
Sequence Identity21%
E-Value 3e-05
GA3410.08
MPQS0.74
z-DOPE0.42
Datasetecoli_membrane
ModPipe VersionModPipe2.0
Model Date2007-08-06

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2jafground state and l1 intermediate of halorhodopsin
DBALI2jafA 
CATH1.20.1070.10 Domain: 2jafA00 Rhopdopsin 7-helix transmembrane proteins (89%)
JenaImageLibrary2jaf 
Target Sequence
UniProtKBH0QG71SubName: Full=Predicted inner membrane protein;
InterProH0QG71 
PFAMH0QG71 
ProdomH0QG71 
UniProtKBC4ZR86SubName: Full=Predicted inner membrane protein;
InterProC4ZR86 
PFAMC4ZR86 
ProdomC4ZR86 
UniProtKBU9XNQ9SubName: Full=Putative membrane protein {ECO:0000313|EMBL:ESA63694.1};
InterProU9XNQ9 
PFAMU9XNQ9 
ProdomU9XNQ9 
UniProtKBB1XDW0SubName: Full=Predicted inner membrane protein;
InterProB1XDW0 
PFAMB1XDW0 
ProdomB1XDW0 
UniProtKBH0QG71SubName: Full=Predicted inner membrane protein;
InterProH0QG71 
PFAMH0QG71 
ProdomH0QG71 
UniProtKBB1XDW0SubName: Full=Predicted inner membrane protein;
InterProB1XDW0 
PFAMB1XDW0 
ProdomB1XDW0 
UniProtKBC4ZR86SubName: Full=Predicted inner membrane protein;
InterProC4ZR86 
PFAMC4ZR86 
ProdomC4ZR86 
UniProtKBQ2M695Predicted inner membrane protein
InterProQ2M695 
PFAMQ2M695 
ProdomQ2M695 
UniProtKBP39314.1YTFF_ECOLI RecName: Full=Inner membrane protein ytfF
InterProP39314.1 
PFAMP39314.1 
ProdomP39314.1 
UniProtKBQ2M695RecName: Full=Inner membrane protein ytfF;
InterProQ2M695 
PFAMQ2M695 
ProdomQ2M695 
UniProtKBP39314RecName: Full=Inner membrane protein ytfF;
InterProP39314 
PFAMP39314 
ProdomP39314 
RefSeqAP_004710.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002929112.1 putative inner membrane protein [Escherichia coli BW2952]
RefSeqNP_418631.1 predicted inner membrane protein [Escherichia coli K12]
RefSeqYP_001732975.1 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenPept1361088S56435 hypothetical 35.5K protein (rpli-cpdb intergenic region) - Escherichia coli
GenPept89110930 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
GenPept85676961predicted inner membrane protein
GenPept238862527predicted inner membrane protein
GenPept218087426unnamed protein product
GenPept218086790unnamed protein product
GenPept218086786unnamed protein product
GenPept1790655predicted inner membrane protein
GenPept170083655 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenPept169891490predicted inner membrane protein
GenPept16132032 (NC_000913) putative transmembrane subunit [Escherichia coli K12]
GenPept238903316 putative inner membrane protein [Escherichia coli BW2952]
GenPept359334317predicted inner membrane protein
GenPept537051ORF_f324
GenPept557274368putative inner membrane protein
GenPept687674970inner membrane protein
GenPept687679278inner membrane protein
GenPept732283YTFF_ECOLI RecName: Full=Inner membrane protein ytfF
GenBankAAC77167.1 predicted inner membrane protein [Escherichia coli K12]
GenBankACB05197.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64525.1 predicted inner membrane protein [Escherichia coli BW2952]
GenBankAAA97106.1 ORF_f324 [Escherichia coli str. K-12 substr. MG1655]