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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 28422494
Original Database ID EN ENSP00000380045.2
Organism Homo sapiens
Annotation mdp-1 protein
Sequence Length 122

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-119
Protein Length122
Template PDB Code2wm8A
Template Region2-122
Sequence Identity77%
E-Value0
GA3411
MPQS1.99231
z-DOPE-1.67
TSVMod MethodMSALL
TSVMod RMSD1.317
TSVMod NO350.961
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2wm8crystal structure of human magnesium-dependent phosphatase 1 of the haloacid dehalogenase superfamily (mgc5987)
DBALI2wm8A 
CATH3.40.50.1000 Domain: 2wm8A00 Rossmann fold (71%)
JenaImageLibrary2wm8 
Target Sequence
SFLD315259107Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBQ86Y84MGC5987 protein
InterProQ86Y84 
PFAMQ86Y84 
ProdomQ86Y84 
GenPept119586465magnesium-dependent phosphatase 1, isoform CRA_b
GenPept28422494MDP-1 protein
GenBankAAH46912.1 MDP-1 protein [Homo sapiens]
GenBankEAW66061.1 magnesium-dependent phosphatase 1, isoform CRA_b [Homo sapiens]
ENSEMBLENSP00000324205SNF7 homolog associated with Alix 2 (HSPC134) (CDA04) (SNF7-1) (Chromatin-modifying protein) (Charged multivesicular body protein 4a) (CHMP4a). [Homo sapiens]
UCSCGenomeBrowserQ86Y84 
ENSEMBLENSP00000324205 
ENSEMBLENSP00000324205TDI sequence
ENSEMBLENSP00000380045