University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 333944273
Original Database ID TR ISPD_ECOLI
Organism Escherichia coli
Annotation a chain a, crystal structure of
2-c-methyl-d-erythritol 4-phosphate
cytidylyltra nsferase (ispd) in
complex with 1,2-propanediol
Sequence Length 235

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region4-228
Protein Length235
Template PDB Code1i52A
Template Region5-229
Sequence Identity100%
E-Value7e-36
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1i52crystal structure of 4-diphosphocytidyl-2-c-methylerythritol (cdp-me) synthase (ygbp) involved in mevalonate independent isoprenoid biosynthesis ; EC: 2.7.7.60 ; PFAM: PF01128 ; SCOP: 61767
DBALI1i52A 
CATH3.90.550.10 Domain: 1i52A00 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A (100%)
JenaImageLibrary1i52 
Target Sequence
UniProtKBQ468932-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)DE (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEPDE cytidylyltransferase) (MCT) (CDP-ME synthetase)
InterProQ46893 
PFAMQ46893 
ProdomQ46893 
PDB3N9WAChain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Ispd) In Complex With 1,2-Propanediol
PDB3N9WBChain B, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Ispd) In Complex With 1,2-Propanediol
GenPept333944273A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Ispd) In Complex With 1,2-Propanediol
GenPept333944274B Chain B, Crystal Structure Of 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase (Ispd) In Complex With 1,2-Propanediol