University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 314874867
Original Database ID SN P20700_chr5:12614110
Organism Homo sapiens
Annotation sequence 170 from patent us 7842466
Sequence Length 585

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region27-388
Protein Length585
Template PDB Code1wp1A
Template Region82-437
Sequence Identity11%
E-Value3e-05
GA3410.02
Datasetsnp-human3
ModPipe VersionModPipe1.0
Model Date2005-10-06

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1wp1crystal structure of the drug-discharge outer membrane protein, oprm
DBALI1wp1A 
CATH2.20.200.10 Domain: 1wp1A02 Outer membrane efflux proteins (OEP) (100%)
JenaImageLibrary1wp1 
Target Sequence
UniProtKBP20700Lamin-B1
InterProP20700 
PFAMP20700 
ProdomP20700 
GenPept314874867Sequence 170 from patent US 7842466