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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B2R6J6
Original Database ID sp P20700
Organism Homo sapiens
Annotation subname: full=lamin b1, isoform
cra_b;subname: full=cdna, flj92980,
homo sapiens lamin b1 (lmnb1),
mrna;
Sequence Length 586

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region428-549
Protein Length586
Template PDB Code2kpwA
Template Region1-122
Sequence Identity92%
E-Value0
GA3411
MPQS1.30489
z-DOPE-0.98
TSVMod MethodMSALL
TSVMod RMSD1.214
TSVMod NO350.987
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2kpwnmr solution structure of lamin-b1 protein from homo sapiens: northeast structural genomics consortium mega target, hr5546a (439-549)
DBALI2kpwA 
JenaImageLibrary2kpw 
Target Sequence
UniProtKBQ96EI6RecName: Full=Lamin-B1;Flags: Precursor;
InterProQ96EI6 
PFAMQ96EI6 
ProdomQ96EI6 
UniProtKBB2R6J6RecName: Full=Lamin-B1;Flags: Precursor;
InterProB2R6J6 
PFAMB2R6J6 
ProdomB2R6J6 
UniProtKBP20700RecName: Full=Lamin-B1;Flags: Precursor;
InterProP20700 
PFAMP20700 
ProdomP20700 
UniProtKBQ3SYN7RecName: Full=Lamin-B1;Flags: Precursor;
InterProQ3SYN7 
PFAMQ3SYN7 
ProdomQ3SYN7 
UniProtKBQ3SYN7Lamin B1
InterProQ3SYN7 
PFAMQ3SYN7 
ProdomQ3SYN7 
UniProtKBB2R6J6SubName: Full=Lamin B1, isoform CRA_b;SubName: Full=cDNA, FLJ92980, Homo sapiens lamin B1 (LMNB1), mRNA;
InterProB2R6J6 
PFAMB2R6J6 
ProdomB2R6J6 
UniProtKBQ3SYN7RecName: Full=Lamin-B1;Flags: Precursor;
InterProQ3SYN7 
PFAMQ3SYN7 
ProdomQ3SYN7 
UniProtKBP20700.2LMNB1_HUMAN RecName: Full=Lamin-B1
InterProP20700.2 
PFAMP20700.2 
ProdomP20700.2 
UniProtKBP20700RecName: Full=Lamin-B1;Flags: Precursor;
InterProP20700 
PFAMP20700 
ProdomP20700 
UniProtKBQ96EI6RecName: Full=Lamin-B1;Flags: Precursor;
InterProQ96EI6 
PFAMQ96EI6 
ProdomQ96EI6 
UniProtKBB2R6J6RecName: Full=Lamin-B1;Flags: Precursor;
InterProB2R6J6 
PFAMB2R6J6 
ProdomB2R6J6 
RefSeqNP_005564.1 lamin-B1 [Homo sapiens]
GenPept119569231lamin B1, isoform CRA_b
GenPept314874868Sequence 171 from patent US 7842466
GenPept307106lamin B
GenPept223088615Sequence 6631 from patent US 6812339
GenPept5031877 lamin-B1 [Homo sapiens]
GenPept2144817VEHULB lamin B1 - human
GenPept189069155unnamed protein product
GenPept534411938Sequence 7 from patent US 8519096
GenPept576840lamin B1
GenPept74354337Lamin B1
GenPept125953LMNB1_HUMAN RecName: Full=Lamin-B1; Flags: Precursor
GenPept261858378lamin B1, partial
GenBankAAC37575.1 lamin B1 [Homo sapiens]
GenBankEAW48846.1 lamin B1, isoform CRA_b [Homo sapiens]
GenBankAAA36162.1 lamin B [Homo sapiens]
GenBankAAI03724.1 Lamin B1 [Homo sapiens]
ENSEMBLENSP00000261366Lamin B1. [Homo sapiens]
UCSCGenomeBrowserP20700 
ENSEMBLENSP00000261366 
ENSEMBLENSP00000261366TDI sequence
ENSEMBLENSP00000261366