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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 223089820
Original Database ID SN P13639_chr19:3927555
Organism Pongo pygmaeus, Homo sapiens
Annotation sequence 7836 from patent us 6812339
Sequence Length 857

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region3-857
Protein Length857
Template PDB Code1n0uA
Template Region4-842
Sequence Identity65%
E-Value0
GA3411
Datasetsnp-human4
ModPipe VersionModPipe1.0
Model Date2006-06-16

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1n0ucrystal structure of yeast elongation factor 2 in complex with sordarin ; PFAM: PF00009 PF00679 PF03144 PF03764 ; SCOP: 79757 79758 79759 79760 79761
DBALI1n0uA 
CATH3.40.50.300 Domain: 1n0uA01 P-loop containing nucleotide triphosphate hydrolases (100%)
CATH2.40.30.10 Domain: 1n0uA02 Translation factors (100%)
CATH3.90.1430.10 Domain: 1n0uA03 Yeast translation eEF2 (G' domain) (100%)
CATH3.30.70.870 Domain: 1n0uA04 Elongation Factor G (Translational Gtpase), domain 3 (100%)
CATH3.30.70.240 Domain: 1n0uA05 Alpha-Beta Plaits (100%)
CATH3.30.230.10 Domain: 1n0uA06 Ribosomal Protein S5; domain 2 (100%)
JenaImageLibrary1n0u 
Target Sequence
UniProtKBP13639Elongation factor 2 (EF-2)
InterProP13639 
PFAMP13639 
ProdomP13639 
UniProtKBQ5R8Z3Elongation factor 2 (EF-2)
InterProQ5R8Z3 
PFAMQ5R8Z3 
ProdomQ5R8Z3 
GenPept223089820Sequence 7836 from patent US 6812339
GenPept239641432Sequence 249 from patent US 7521195
GenPept281036095Sequence 252 from patent US 7608413
GenPept314536801Sequence 732 from patent US 7807392
GenPept314879930Sequence 172 from patent US 7842467
GenPept331630745Sequence 915 from patent US 7919467
GenPept344967446Sequence 252 from patent US 7998689