University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75898
Original Database ID ref NP_415532.3
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yxek protein
Sequence Length 382

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region20-371
Protein Length382
Template PDB Code3raoA
Template Region1-344
Sequence Identity29%
E-Value0
GA3411
MPQS1.26657
z-DOPE-0.51
TSVMod MethodMSALL
TSVMod RMSD4.521
TSVMod NO350.76
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3rao
DBALI3raoA 
JenaImageLibrary3rao 
Target Sequence
UniProtKBE3PJI0RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProE3PJI0 
PFAME3PJI0 
ProdomE3PJI0 
UniProtKBH9UQS4RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProH9UQS4 
PFAMH9UQS4 
ProdomH9UQS4 
UniProtKBD8AQG6RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProD8AQG6 
PFAMD8AQG6 
ProdomD8AQG6 
UniProtKBP75898RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProP75898 
PFAMP75898 
ProdomP75898 
UniProtKBB1X9D3RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProB1X9D3 
PFAMB1X9D3 
ProdomB1X9D3 
UniProtKBV1ANL6RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProV1ANL6 
PFAMV1ANL6 
ProdomV1ANL6 
UniProtKBC4ZQE0RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProC4ZQE0 
PFAMC4ZQE0 
ProdomC4ZQE0 
UniProtKBH0Q9R1RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProH0Q9R1 
PFAMH0Q9R1 
ProdomH0Q9R1 
UniProtKBE1HQC3RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProE1HQC3 
PFAME1HQC3 
ProdomE1HQC3 
UniProtKBA0A0E3KEW0RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699};
InterProA0A0E3KEW0 
PFAMA0A0E3KEW0 
ProdomA0A0E3KEW0 
UniProtKBD8B6U4RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214};EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};
InterProD8B6U4 
PFAMD8B6U4 
ProdomD8B6U4 
UniProtKBD8B6U4RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProD8B6U4 
PFAMD8B6U4 
ProdomD8B6U4 
UniProtKBD8AQG6RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProD8AQG6 
PFAMD8AQG6 
ProdomD8AQG6 
UniProtKBC4ZQE0SubName: Full=Predicted monooxygenase;
InterProC4ZQE0 
PFAMC4ZQE0 
ProdomC4ZQE0 
UniProtKBB1X9D3SubName: Full=Predicted monooxygenase;
InterProB1X9D3 
PFAMB1X9D3 
ProdomB1X9D3 
UniProtKBA0A236RLG3Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699}EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699}
InterProA0A236RLG3 
PFAMA0A236RLG3 
ProdomA0A236RLG3 
UniProtKBE1HQC3RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProE1HQC3 
PFAME1HQC3 
ProdomE1HQC3 
UniProtKBA0A1R1KFF4Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699}EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699}
InterProA0A1R1KFF4 
PFAMA0A1R1KFF4 
ProdomA0A1R1KFF4 
UniProtKBE3PJI0RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProE3PJI0 
PFAME3PJI0 
ProdomE3PJI0 
UniProtKBH0Q9R1RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProH0Q9R1 
PFAMH0Q9R1 
ProdomH0Q9R1 
UniProtKBH9UQS4SubName: Full=Luciferase monooxygenase family protein;
InterProH9UQS4 
PFAMH9UQS4 
ProdomH9UQS4 
UniProtKBP75898YXEK PROTEIN
InterProP75898 
PFAMP75898 
ProdomP75898 
UniProtKBB1X9D3RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000255|HAMAP-Rule:MF_01699};EC=1.14.99.46 {ECO:0000255|HAMAP-Rule:MF_01699};
InterProB1X9D3 
PFAMB1X9D3 
ProdomB1X9D3 
UniProtKBP75898.3RUTA_ECOLI RecName: Full=Putative monooxygenase rutA; AltName: Full=Pyrimidine utilization protein A
InterProP75898.3 
PFAMP75898.3 
ProdomP75898.3 
UniProtKBP75898RecName: Full=Pyrimidine monooxygenase RutA;EC=1.14.99.46;
InterProP75898 
PFAMP75898 
ProdomP75898 
UniProtKBC4ZQE0RecName: Full=Pyrimidine monooxygenase RutA {ECO:0000255|HAMAP-Rule:MF_01699};EC=1.14.99.46 {ECO:0000255|HAMAP-Rule:MF_01699};
InterProC4ZQE0 
PFAMC4ZQE0 
ProdomC4ZQE0 
RefSeqZP_07170066.1 pyrimidine utilization protein A [Escherichia coli MS 175-1]
RefSeqZP_07163596.1 pyrimidine utilization protein A [Escherichia coli MS 116-1]
RefSeqAP_001643.1 predicted monooxygenase [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002926068.1 putative monooxygenase [Escherichia coli BW2952]
RefSeqNP_415532.3 pyrimidine oxygenase, FMN-dependent [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001729991.1 monooxygenase [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_07246586.1 pyrimidine utilization protein A [Escherichia coli MS 146-1]
GenPept817574330pyrimidine oxygenase, FMN-dependent
GenPept300949608 pyrimidine utilization protein A [Escherichia coli MS 116-1]
GenPept89107863 predicted monooxygenase [Escherichia coli str. K-12 substr. W3110]
GenPept4062575predicted monooxygenase
GenPept383102358Luciferase monooxygenase family protein
GenPept359331695predicted monooxygenase
GenPept309701289putative monooxygenase (pyrimidine utilization protein A)
GenPept301646727 pyrimidine utilization protein A [Escherichia coli MS 146-1]
GenPept301075077 pyrimidine utilization protein A [Escherichia coli MS 146-1]
GenPept300957893 pyrimidine utilization protein A [Escherichia coli MS 175-1]
GenPept300450990 pyrimidine utilization protein A [Escherichia coli MS 116-1]
GenPept300315408 pyrimidine utilization protein A [Escherichia coli MS 175-1]
GenPept238900272 putative monooxygenase [Escherichia coli BW2952]
GenPept238862675predicted monooxygenase
GenPept1787247pyrimidine oxygenase, FMN-dependent
GenPept170080671 monooxygenase [Escherichia coli str. K-12 substr. DH10B]
GenPept169888506predicted monooxygenase
GenPept161789059RUTA_ECOLI RecName: Full=Putative monooxygenase rutA; AltName: Full=Pyrimidine utilization protein A
GenPept49176071 pyrimidine oxygenase, FMN-dependent [Escherichia coli str. K-12 substr. MG1655]
GenPept557271386putative monooxygenase
GenPept817590893pyrimidine oxygenase, FMN-dependent
GenPept817586752pyrimidine oxygenase, FMN-dependent
GenPept817582611pyrimidine oxygenase, FMN-dependent
GenPept817578472pyrimidine oxygenase, FMN-dependent
GenPept802134566pyrimidine oxygenase, FMN-dependent
GenPept801067546pyrimidine monooxygenase RutA
GenPept7466133B64843 hypothetical protein b1012 - Escherichia coli
GenPept731469941pyrimidine oxygenase, FMN-dependent
GenPept16128978 (NC_000913) orf, hypothetical protein [Escherichia coli K12]
GenPept730582212pyrimidine oxygenase, FMN-dependent
GenPept687676188pyrimidine oxygenase
GenPept687671924pyrimidine oxygenase
GenPept682118556pyrimidine oxygenase, FMN-dependent
GenBankACB02213.1 predicted monooxygenase [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64673.1 predicted monooxygenase [Escherichia coli BW2952]
GenBankEFJ65192.1 pyrimidine utilization protein A [Escherichia coli MS 175-1]
GenBankEFK14610.1 pyrimidine utilization protein A [Escherichia coli MS 116-1]
GenBankEFK89883.1 pyrimidine utilization protein A [Escherichia coli MS 146-1]
GenBankAAC74097.1 pyrimidine oxygenase, FMN-dependent [Escherichia coli str. K-12 substr. MG1655]