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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 314883557
Original Database ID TR SFR1_HUMAN
Organism Homo sapiens, Mus musculus
Annotation sequence 3799 from patent us 7842467
Sequence Length 247

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region12-198
Protein Length247
Template PDB Code1fnxH
Template Region36-207
Sequence Identity18%
E-Value8e-18
GA3410.87
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1fnxsolution structure of the huc rbd1-rbd2 complexed with the au-rich element ; PFAM: PF00076
DBALI1fnxH 
CATH3.30.70.330 Domain: 1fnxH01 Alpha-Beta Plaits (100%)
CATH3.30.70.330 Domain: 1fnxH02 Alpha-Beta Plaits (100%)
JenaImageLibrary1fnx 
Target Sequence
UniProtKBQ07955Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing factor SF2,DE P33 subunit) (Alternative splicing factor ASF-1)
InterProQ07955 
PFAMQ07955 
ProdomQ07955 
UniProtKBQ6PDM2Splicing factor, arginine/serine-rich 1
InterProQ6PDM2 
PFAMQ6PDM2 
ProdomQ6PDM2 
GenPept314883557Sequence 3799 from patent US 7842467
UCSCGenomeBrowserQ07955