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ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link Q12913
Original Database ID CU Q12913
Organism Homo sapiens
Annotation receptor-type tyrosine-protein
phosphatase eta precursor (ec
3.1.3.48)(protein-t yrosine phosphatase
eta) (r-ptp-eta) (hptp eta) (protein-tyrosine
pho ...
Sequence Length 1337
 

SNP Information

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SNP ViewGenome
Browser		ResidueAA-Residue
Variants		InterfaceLigandStabilityValidated
rs4752904 D872 DE   X
rs11039554 I1235 IT   P X
7 SNPs found but only 2 displayed. (SNPs in modeled regions)
 

Sequence Model Coverage summary
for all models of this sequence

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2b3ocrystal structure of human tyrosine phosphatase shp-1
DBALI2b3oA 
CATH3.30.505.10 Domain: 2b3oA01 SHC Adaptor Protein (88%)
CATH3.30.505.10 Domain: 2b3oA02 SHC Adaptor Protein (100%)
CATH3.90.190.10 Domain: 2b3oA03 Protein tyrosine phosphatase superfamily (100%)
JenaImageLibrary2b3o 
Target Sequence
UniProtKBQ12913Receptor-type tyrosine-protein phosphatase eta precursor (EC 3.1.3.48)(Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (Density-enhanced phospha
InterProQ12913 
PFAMQ12913 
ProdomQ12913 
UniProtKBQ15255Receptor-type tyrosine-protein phosphatase eta precursor (EC 3.1.3.48)(Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (Density-enhanced phospha
InterProQ15255 
PFAMQ15255 
ProdomQ15255 
UniProtKBQ8NHM2Receptor-type tyrosine-protein phosphatase eta precursor (EC 3.1.3.48)(Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (Density-enhanced phospha
InterProQ8NHM2 
PFAMQ8NHM2 
ProdomQ8NHM2 
GenPept32172451PTPRJ_HUMAN Receptor-type tyrosine-protein phosphatase eta precursor (Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein-tyrosine phosphatase receptor type J) (Density-enhanced phosphat
GenPept353304880Sequence 145 from patent US 8039210
GenPept568527735Sequence 2316 from patent US 8586006
GenPept915840043Sequence 145 from patent US 9012145
UCSCGenomeBrowserQ12913