University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O43655
Original Database ID gi 6554165
Organism Homo sapiens
Annotation receptor protein tyrosine phosphatase
precursor
Sequence Length 1463

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region970-1164
Protein Length1463
Template PDB Code1rxdA
Template Region9-154
Sequence Identity17%
E-Value7e-20
GA3410.24
Datasetnysgxrc_1rxd_307
ModPipe VersionModPipe1.0
Model Date2007-03-20

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1rxdcrystal structure of human protein tyrosine phosphatase 4a1
DBALI1rxdA 
CATH3.90.190.10 Domain: 1rxdA00 Protein tyrosine phosphatase superfamily (96%)
JenaImageLibrary1rxd 
Target Sequence
UniProtKBO43655Receptor protein tyrosine phosphatase precursor
InterProO43655 
PFAMO43655 
ProdomO43655 
UniProtKBQ9UBD2Receptor-type tyrosine-protein phosphatase T precursor (EC 3.1.3.48)DE (R-PTP-T) (RPTP-rho)
InterProQ9UBD2 
PFAMQ9UBD2 
ProdomQ9UBD2 
GenPept228183814Sequence 22 from patent US 7494775
GenPept353304909Sequence 174 from patent US 8039210
GenPept430255340Sequence 22 from patent US 8323906
GenPept6554165receptor protein tyrosine phosphatase
GenPept6631110 protein tyrosine phosphatase, receptor type, T [Homo sapiens]
GenPept915840096Sequence 174 from patent US 9012145
GenBankAAD09421.2 receptor protein tyrosine phosphatase [Homo sapiens]