University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P00968.2
Original Database ID ref NP_414574.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation carb_ecoli recname: full=carbamoyl-phosphate
synthase large chain; altname:
full =carbamoyl-phosphate synthetase
ammonia chain
Sequence Length 1073

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-1073
Protein Length1073
Template PDB Code1a9xA
Template Region1-1073
Sequence Identity100%
E-Value0
GA3411
MPQS2.2196
z-DOPE-1.42
TSVMod MethodMTALL
TSVMod RMSD1.779
TSVMod NO350.963
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1a9xcarbamoyl phosphate synthetase: caught in the act of glutamine hydrolysis ; EC: 6.3.5.5 ; PFAM: PF00117 PF00988 ; SCOP: 18550 31479 31657 31658 41502 41503
DBALI1a9xA 
CATH3.40.50.20 Domain: 1a9xA01 Rossmann fold (100%)
CATH3.30.470.20 Domain: 1a9xA02 ATP-grasp fold, B domain (100%)
CATH3.30.1490.20 Domain: 1a9xA03 ATP-grasp fold, A domain (100%)
CATH1.10.1030.10 Domain: 1a9xA04 Carbamoyl Phosphate Synthetase; Chain A, domain 4 (100%)
CATH3.40.50.20 Domain: 1a9xA05 Rossmann fold (100%)
CATH3.30.470.20 Domain: 1a9xA06 ATP-grasp fold, B domain (100%)
CATH3.30.1490.20 Domain: 1a9xA07 ATP-grasp fold, A domain (100%)
CATH3.40.50.1380 Domain: 1a9xA08 Rossmann fold (100%)
JenaImageLibrary1a9x 
Target Sequence
UniProtKBT9ULA2RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProT9ULA2 
PFAMT9ULA2 
ProdomT9ULA2 
UniProtKBN2VMB8RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2VMB8 
PFAMN2VMB8 
ProdomN2VMB8 
UniProtKBN2V412RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2V412 
PFAMN2V412 
ProdomN2V412 
UniProtKBN2TE32RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2TE32 
PFAMN2TE32 
ProdomN2TE32 
UniProtKBN2QZB3RecName: Full=Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116};EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};
InterProN2QZB3 
PFAMN2QZB3 
ProdomN2QZB3 
UniProtKBN2ISD8RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2ISD8 
PFAMN2ISD8 
ProdomN2ISD8 
UniProtKBM2PYL8RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProM2PYL8 
PFAMM2PYL8 
ProdomM2PYL8 
UniProtKBL3LSE0RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProL3LSE0 
PFAML3LSE0 
ProdomL3LSE0 
UniProtKBI2Y419RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProI2Y419 
PFAMI2Y419 
ProdomI2Y419 
UniProtKBI0ZMX3RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProI0ZMX3 
PFAMI0ZMX3 
ProdomI0ZMX3 
UniProtKBH9UN26RecName: Full=Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116};EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};
InterProH9UN26 
PFAMH9UN26 
ProdomH9UN26 
UniProtKBG2F1C0RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProG2F1C0 
PFAMG2F1C0 
ProdomG2F1C0 
UniProtKBF9R3H2RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProF9R3H2 
PFAMF9R3H2 
ProdomF9R3H2 
UniProtKBT9AGH0RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProT9AGH0 
PFAMT9AGH0 
ProdomT9AGH0 
UniProtKBE2WQH0RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProE2WQH0 
PFAME2WQH0 
ProdomE2WQH0 
UniProtKBC9QSB9RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;Flags: Precursor;
InterProC9QSB9 
PFAMC9QSB9 
ProdomC9QSB9 
UniProtKBT6NII5RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProT6NII5 
PFAMT6NII5 
ProdomT6NII5 
UniProtKBB1XBF8RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProB1XBF8 
PFAMB1XBF8 
ProdomB1XBF8 
UniProtKBN2WH01RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2WH01 
PFAMN2WH01 
ProdomN2WH01 
UniProtKBN2WUP0RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2WUP0 
PFAMN2WUP0 
ProdomN2WUP0 
UniProtKBC4ZPV9RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProC4ZPV9 
PFAMC4ZPV9 
ProdomC4ZPV9 
UniProtKBS1PLP3RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProS1PLP3 
PFAMS1PLP3 
ProdomS1PLP3 
UniProtKBT8NDH9RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProT8NDH9 
PFAMT8NDH9 
ProdomT8NDH9 
UniProtKBN3MHH9RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN3MHH9 
PFAMN3MHH9 
ProdomN3MHH9 
UniProtKBA0A0G3HKW7SubName: Full=Carbamoyl-phosphate synthase large subunit protein {ECO:0000313|EMBL:AKK13956.1};
InterProA0A0G3HKW7 
PFAMA0A0G3HKW7 
ProdomA0A0G3HKW7 
UniProtKBN2WYG6RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2WYG6 
PFAMN2WYG6 
ProdomN2WYG6 
UniProtKBA0A079DMI9RecName: Full=Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116};EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};
InterProA0A079DMI9 
PFAMA0A079DMI9 
ProdomA0A079DMI9 
UniProtKBA0A024L7L4RecName: Full=Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116};EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};
InterProA0A024L7L4 
PFAMA0A024L7L4 
ProdomA0A024L7L4 
UniProtKBH0Q736RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProH0Q736 
PFAMH0Q736 
ProdomH0Q736 
UniProtKBS0YAA5RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProS0YAA5 
PFAMS0YAA5 
ProdomS0YAA5 
UniProtKBM8ZIS6RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProM8ZIS6 
PFAMM8ZIS6 
ProdomM8ZIS6 
UniProtKBN4MWG1RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN4MWG1 
PFAMN4MWG1 
ProdomN4MWG1 
UniProtKBP00968RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProP00968 
PFAMP00968 
ProdomP00968 
UniProtKBN2PU82RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProN2PU82 
PFAMN2PU82 
ProdomN2PU82 
UniProtKBT8DYW4RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProT8DYW4 
PFAMT8DYW4 
ProdomT8DYW4 
UniProtKBC4ZPV9SubName: Full=Carbamoyl-phosphate synthase large subunit;
InterProC4ZPV9 
PFAMC4ZPV9 
ProdomC4ZPV9 
UniProtKBB1XBF8SubName: Full=Carbamoyl-phosphate synthase large subunit;
InterProB1XBF8 
PFAMB1XBF8 
ProdomB1XBF8 
UniProtKBC9QSB9SubName: Full=Carbamoyl phosphate synthase large subunit;SubName: Full=Carbamoyl-phosphate synthase, large subunit;Flags: Precursor;
InterProC9QSB9 
PFAMC9QSB9 
ProdomC9QSB9 
UniProtKBA0A8F9MIR1SubName: Full=Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:QYE25093.1}EC=6.3.5.5 {ECO:0000313|EMBL:QYE25093.1}
InterProA0A8F9MIR1 
PFAMA0A8F9MIR1 
ProdomA0A8F9MIR1 
UniProtKBA0A8F8DEI6SubName: Full=Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:QXZ36318.1}EC=6.3.5.5 {ECO:0000313|EMBL:QXZ36318.1}
InterProA0A8F8DEI6 
PFAMA0A8F8DEI6 
ProdomA0A8F8DEI6 
UniProtKBA0A829E0L7SubName: Full=Carbamoyl-phosphate synthase large chain {ECO:0000313|EMBL:ENB16625.1}EC=6.3.5.5 {ECO:0000313|EMBL:ENB16625.1}
InterProA0A829E0L7 
PFAMA0A829E0L7 
ProdomA0A829E0L7 
UniProtKBI2Y419SubName: Full=Carbamoyl-phosphate synthase, large subunit;EC=6.3.5.5;
InterProI2Y419 
PFAMI2Y419 
ProdomI2Y419 
UniProtKBA0A0M7MWQ4Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210}AltName: Full=Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule
InterProA0A0M7MWQ4 
PFAMA0A0M7MWQ4 
ProdomA0A0M7MWQ4 
UniProtKBI0ZMX3SubName: Full=Carbamoyl-phosphate synthase large chain;
InterProI0ZMX3 
PFAMI0ZMX3 
ProdomI0ZMX3 
UniProtKBH9UN26SubName: Full=Carbamoyl-phosphate synthase large chain;
InterProH9UN26 
PFAMH9UN26 
ProdomH9UN26 
UniProtKBG2F1C0SubName: Full=Carbamoyl phosphate synthase large subunit;EC=6.3.5.5;
InterProG2F1C0 
PFAMG2F1C0 
ProdomG2F1C0 
UniProtKBF9R3H2SubName: Full=Carbamoyl phosphate synthase large subunit;EC=6.3.5.5;
InterProF9R3H2 
PFAMF9R3H2 
ProdomF9R3H2 
UniProtKBA0A5Q3TG69Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210}AltName: Full=Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule
InterProA0A5Q3TG69 
PFAMA0A5Q3TG69 
ProdomA0A5Q3TG69 
UniProtKBH0Q736SubName: Full=Carbamoyl-phosphate synthase large subunit;
InterProH0Q736 
PFAMH0Q736 
ProdomH0Q736 
UniProtKBE2WQH0SubName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;
InterProE2WQH0 
PFAME2WQH0 
ProdomE2WQH0 
UniProtKBP00968.2CARB_ECOLI RecName: Full=Carbamoyl-phosphate synthase large chain; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain
InterProP00968.2 
PFAMP00968.2 
ProdomP00968.2 
UniProtKBP00968RecName: Full=Carbamoyl-phosphate synthase large chain;EC=6.3.5.5;AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
InterProP00968 
PFAMP00968 
ProdomP00968 
RefSeqYP_002925234.1 carbamoyl-phosphate synthase large subunit [Escherichia coli BW2952]
RefSeqYP_001729016.1 carbamoyl-phosphate synthase large subunit [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_000697.1 carbamoyl-phosphate synthase large subunit [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_414574.1 carbamoyl-phosphate synthase large subunit [Escherichia coli str. K-12 substr. MG1655]
PDB1BXRG Chain G, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
PDB1BXRAChain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
PDB1C3OGChain G, Crystal Structure Of The Carbamoyl Phosphate Synthetase: Small Subunit Mutant C269s With Bound Glutamine
PDB1CS0G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase Complexed At Cys269 In The Small Subunit With The Tetrahedral Mimic L-Glutamate Gamma-Semialdehyde
PDB1CS0AChain A, Crystal Structure Of Carbamoyl Phosphate Synthetase Complexed At Cys269 In The Small Subunit With The Tetrahedral Mimic L-glutamate Gamma-semialdehyde
PDB1CS0CChain C, Crystal Structure Of Carbamoyl Phosphate Synthetase Complexed At Cys269 In The Small Subunit With The Tetrahedral Mimic L-glutamate Gamma-semialdehyde
PDB1CS0EChain E, Crystal Structure Of Carbamoyl Phosphate Synthetase Complexed At Cys269 In The Small Subunit With The Tetrahedral Mimic L-glutamate Gamma-semialdehyde
PDB1CS0GChain G, Crystal Structure Of Carbamoyl Phosphate Synthetase Complexed At Cys269 In The Small Subunit With The Tetrahedral Mimic L-glutamate Gamma-semialdehyde
PDB1JDBK Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
PDB1JDBBChain B, Carbamoyl Phosphate Synthetase From Escherichia Coli
PDB1C3OEChain E, Crystal Structure Of The Carbamoyl Phosphate Synthetase: Small Subunit Mutant C269s With Bound Glutamine
PDB1C3OCChain C, Crystal Structure Of The Carbamoyl Phosphate Synthetase: Small Subunit Mutant C269s With Bound Glutamine
PDB1C3OAChain A, Crystal Structure Of The Carbamoyl Phosphate Synthetase: Small Subunit Mutant C269s With Bound Glutamine
PDB1BXRCChain C, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
PDB1BXREChain E, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
PDB1BXRGChain G, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
PDB1C30AChain A, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small Subunit Mutation C269s
PDB1C30CChain C, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small Subunit Mutation C269s
PDB1C30EChain E, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small Subunit Mutation C269s
PDB1C30GChain G, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small Subunit Mutation C269s
PDB1C3OG Chain G, Crystal Structure Of The Carbamoyl Phosphate Synthetase: Small Subunit Mutant C269s With Bound Glutamine
PDB1JDBEChain E, Carbamoyl Phosphate Synthetase From Escherichia Coli
PDB1JDBHChain H, Carbamoyl Phosphate Synthetase From Escherichia Coli
PDB1T36GChain G, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase Small Subunit Mutant C248d Complexed With Uridine 5'-Monophosphate
PDB1C30G Chain G, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small Subunit Mutation C269s
PDB1KEEAChain A, Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin
PDB1T36EChain E, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase Small Subunit Mutant C248d Complexed With Uridine 5'-Monophosphate
PDB1T36CChain C, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase Small Subunit Mutant C248d Complexed With Uridine 5'-Monophosphate
PDB1T36AChain A, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase Small Subunit Mutant C248d Complexed With Uridine 5'-Monophosphate
PDB1T36G Chain G, Crystal Structure Of E. Coli Carbamoyl Phosphate Synthetase Small Subunit Mutant C248d Complexed With Uridine 5'- Monophosphate
PDB1JDBKChain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
PDB1KEEG Chain G, Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin
PDB1KEECChain C, Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin
PDB1KEEGChain G, Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin
PDB1KEEEChain E, Inactivation Of The Amidotransferase Activity Of Carbamoyl Phosphate Synthetase By The Antibiotic Acivicin
GenPept359330899carbamoyl-phosphate synthase large subunit
GenPept383101410Carbamoyl-phosphate synthase large chain
GenPept41079unnamed protein product
GenPept4929935A Chain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
GenPept4929939E Chain E, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
GenPept4929937C Chain C, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp
GenPept3318829K Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli
GenPept3318825H Chain H, Carbamoyl Phosphate Synthetase From Escherichia Coli
GenPept3318821E Chain E, Carbamoyl Phosphate Synthetase From Escherichia Coli