University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1841855
Original Database ID
Organism Escherichia coli
Annotation general aromatic amino acid permease
Sequence Length 457

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region10-452
Protein Length457
Template PDB Code3gi8C
Template Region2-425
Sequence Identity17%
E-Value0
GA3410.73
MPQS1.17887
z-DOPE-0.57
Datasetcsmp_9-09
ModPipe VersionSVNx.x
Model Date2009-10-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3gi8crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment
DBALI3gi8C 
JenaImageLibrary3gi8 
Target Sequence
UniProtKBP15993Aromatic amino acid transport protein aroP (General aromatic aminoDE acid permease)
InterProP15993 
PFAMP15993 
ProdomP15993 
GenPept1841855general aromatic amino acid permease
GenPept2506093AROP_ECOLI AROMATIC AMINO ACID TRANSPORT PROTEIN AROP (GENERAL AROMATIC AMINO ACID PERMEASE)
GenPept443761986Sequence 14283 from patent US 8343764
GenBankAAC45299.1 general aromatic amino acid permease [Escherichia coli]