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ModBase: Database of Comparative Protein Structure Models

Model Details Page: SNP Information

Sequence Information

Primary Database Link Q16827
Original Database ID gi 33112422
Organism Homo sapiens
Annotation recname: full=receptor-type tyrosine-protein
phosphatase o;ec=3.1.3.48;altname:
full=glomerular epithelial protein
1;altname: full=protein tyrosine
p ...
Sequence Length 1216
 

SNP Information

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SNP ViewGenome
Browser		ResidueAA-Residue
Variants		InterfaceLigandStabilityValidated
rs4356288 S1137 SR   * PC
rs3190975 F1161 FI   X
3 SNPs found but only 2 displayed. (SNPs in modeled regions)
 

Sequence Model Coverage summary
for all models of this sequence

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1rxdcrystal structure of human protein tyrosine phosphatase 4a1
DBALI1rxdA 
CATH3.90.190.10 Domain: 1rxdA00 Protein tyrosine phosphatase superfamily (99%)
JenaImageLibrary1rxd 
Target Sequence
UniProtKBQ13101RecName: Full=Receptor-type tyrosine-protein phosphatase O;EC=3.1.3.48;AltName: Full=Glomerular epithelial protein 1;AltName: Full=Protein tyrosine phosphatase U2;Short=PTPase U2;Short=PTP-U2;Flags: P
InterProQ13101 
PFAMQ13101 
ProdomQ13101 
UniProtKBQ16827RecName: Full=Receptor-type tyrosine-protein phosphatase O;EC=3.1.3.48;AltName: Full=Glomerular epithelial protein 1;AltName: Full=Protein tyrosine phosphatase U2;Short=PTPase U2;Short=PTP-U2;Flags: P
InterProQ16827 
PFAMQ16827 
ProdomQ16827 
GenPept2136062S60613 protein-tyrosine-phosphatase (EC 3.1.3.48) U2 precursor - human
GenPept33112422PTPRO_HUMAN Receptor-type tyrosine-protein phosphatase O precursor (Glomerular epithelial protein 1) (Protein tyrosine phosphatase U2) (PTPase U2) (PTP-U2)
GenPept963059protein tyrosine phosphatase
EMBLCAA88425.1 
UCSCGenomeBrowserQ16827