University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1418932
Original Database ID gi 1418932
Organism Homo sapiens
Annotation human phosphotyrosine phosphatase
kappa
Sequence Length 1439

Dataset Information:

The newest dataset for this sequence was created on 2007-03-20. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region232-384
Protein Length1439
Template PDB Code1f6fB
Template Region41-202
Sequence Identity14%
E-Value0.0002
GA3410.1
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-Mut Somatic mutation found in advanced pancreatic tumor for CCDS5137.1 E1301V
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1f6fcrystal structure of the ternary complex between ovine placental lactogen and the extracellular domain of the rat prolactin receptor ; PFAM: PF00041 PF00103 ; SCOP: 22033 22034
DBALI1f6fB 
CATH2.60.40.10 Domain: 1f6fB01 Immunoglobulins (63%)
CATH2.60.40.10 Domain: 1f6fB02 Immunoglobulins (100%)
JenaImageLibrary1f6f 
Target Sequence
UniProtKBQ15262Receptor-type tyrosine-protein phosphatase kappa precursorDE (EC 3.1.3.48) (Protein-tyrosine phosphatase kappa) (R-PTP-kappa)
InterProQ15262 
PFAMQ15262 
ProdomQ15262 
GenPept1418932human phosphotyrosine phosphatase kappa
GenPept2499753PTPK_HUMAN PROTEIN-TYROSINE PHOSPHATASE KAPPA PRECURSOR (R-PTP-KAPPA)
GenPept389925817Sequence 480 from patent US 8168586
GenPept544076995Sequence 480 from patent US 8524238
EMBLCAA94519.1 
UCSCGenomeBrowserQ15262