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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O43425
Original Database ID EN ENSP00000322234
Organism Homo sapiens
Annotation recname: full=synaptojanin-1;ec=3.1.3.36;altname:
full=synaptic inositol 1,4,5-t
risphosphate 5-phosphatase 1;
Sequence Length 1573

Dataset Information:

The newest dataset for this sequence was created on 2013-10-23. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1269-1539
Protein Length1573
Template PDB Code1gteA
Template Region2-222
Sequence Identity16%
E-Value0
GA3410.05
MPQS-0.262418
z-DOPE1.04
TSVMod MethodMTALL
TSVMod RMSD23.891
TSVMod NO350.017
Datasethuman_2010_A1
ModPipe VersionSVN.r1188:1193
Model Date2010-11-02

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1gtedihydropyrimidine dehydrogenase (dpd) from pig, binary complex with 5-iodouracil ; EC: 1.3.1.2 ; PFAM: PF00037 PF00070 PF01180 ; SCOP: 70440 70441 70442 70443 70444
DBALI1gteA 
CATH1.10.1060.10 Domain: 1gteA02 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 (100%)
JenaImageLibrary1gte 
Target Sequence
UniProtKBQ4KMR1RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProQ4KMR1 
PFAMQ4KMR1 
ProdomQ4KMR1 
UniProtKBO94984RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO94984 
PFAMO94984 
ProdomO94984 
UniProtKBO43426RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO43426 
PFAMO43426 
ProdomO43426 
UniProtKBO43425RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO43425 
PFAMO43425 
ProdomO43425 
UniProtKBO43425RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO43425 
PFAMO43425 
ProdomO43425 
UniProtKBQ4KMR1RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProQ4KMR1 
PFAMQ4KMR1 
ProdomQ4KMR1 
UniProtKBO43426RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO43426 
PFAMO43426 
ProdomO43426 
UniProtKBO43426.2SYNJ1_HUMAN RecName: Full=Synaptojanin-1; AltName: Full=Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1
InterProO43426.2 
PFAMO43426.2 
ProdomO43426.2 
UniProtKBO94984RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1;
InterProO94984 
PFAMO94984 
ProdomO94984 
RefSeqNP_003886.2 synaptojanin 1 isoform a [Homo sapiens]
GenPept119630269synaptojanin 1, isoform CRA_b
GenPept215273894SYNJ1_HUMAN RecName: Full=Synaptojanin-1; AltName: Full=Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1
GenPept44921606 synaptojanin 1 isoform a [Homo sapiens]
GenPept568528653Sequence 4613 from patent US 8586006
GenBankEAX09864.1 synaptojanin 1, isoform CRA_b [Homo sapiens]
ENSEMBLENSP00000322234