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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O43425
Original Database ID CU O43426
Organism Homo sapiens
Annotation recname: full=synaptojanin-1;ec=3.1.3.36;altname:
full=synaptic inositol-1,4,5-t
risphosphate 5-phosphatase 1;
Sequence Length 1575

Dataset Information:

The newest dataset for this sequence was created on 2007-08-06. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region888-972
Protein Length1575
Template PDB Code2dnrA
Template Region887-971
Sequence Identity93%
E-Value 1.7e-12
GA3411
MPQS1.19
z-DOPE-1.27
Datasethuman_4-2007
ModPipe VersionModPipe2.0
Model Date2007-08-06

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2dnrsolution structure of rna binding domain in synaptojanin 1
DBALI2dnrA 
JenaImageLibrary2dnr 
Target Sequence
UniProtKBO43425RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1;
InterProO43425 
PFAMO43425 
ProdomO43425 
UniProtKBO43426RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1;
InterProO43426 
PFAMO43426 
ProdomO43426 
UniProtKBO94984RecName: Full=Synaptojanin-1;EC=3.1.3.36;AltName: Full=Synaptic inositol-1,4,5-trisphosphate 5-phosphatase 1;
InterProO94984 
PFAMO94984 
ProdomO94984 
GenPept206989683unnamed protein product
GenPept2702323synaptojanin
GenPept311817561unnamed protein product
GenPept4507335 synaptojanin 1; inositol 5'-phosphatase (synaptojanin 1); synaptojanin-1, polyphosphoinositide phosphatase [Homo sapien
GenPept8134730SYJ1_HUMAN SYNAPTOJANIN 1 (SYNAPTIC INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1)
GenBankAAC51922.1 synaptojanin [Homo sapiens]
UCSCGenomeBrowserO43426