University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 148225
Original Database ID GI 148225
Organism Escherichia coli, Escherichia coli K-12
Annotation o171
Sequence Length 171

Dataset Information:

The newest dataset for this sequence was created on 2013-03-06. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-153
Protein Length171
Template PDB Code3pgvA
Template Region39-191
Sequence Identity81%
E-Value0
GA3411
MPQS1.85044
z-DOPE-0.86
TSVMod MethodMSALL
TSVMod RMSD1.497
TSVMod NO350.942
DatasetMW-EFI_update_D9_D1
ModPipe VersionSVN.r1409M
Model Date2013-03-06

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3pgv
DBALI3pgvA 
JenaImageLibrary3pgv 
Target Sequence
SFLD148225Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
C65187 yigL protein - Escherichia coli (strain K-12)
GenPept148225o171
GenPept1790260orf, hypothetical protein
GenPept7467178C65187 yigL protein - Escherichia coli (strain K-12)
GenBankAAA67622.1 o171 [Escherichia coli str. K-12 substr. MG1655]