University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 887837
Original Database ID tr D8AK98
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation orf_f644
Sequence Length 644

Dataset Information:

The newest dataset for this sequence was created on 2007-03-17. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region310-410
Protein Length644
Template PDB Code2o3jA
Template Region4-96
Sequence Identity22%
E-Value1.3
GA3410.51
Datasetnysgxrc_2o3j_307
ModPipe VersionModPipe1.0
Model Date2007-03-17

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2o3jstructure of caenorhabditis elegans udp-glucose dehydrogenase
DBALI2o3jA 
CATH3.40.50.720 Domain: 2o3jA01 NAD(P)-binding Rossmann-like Domain (42%)
JenaImageLibrary2o3j 
Target Sequence
UniProtKBW1F8L6SubName: Full=Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:CDL29417.1};EC=1.4.1.13 {ECO:0000313|EMBL:CDL29417.1};
InterProW1F8L6 
PFAMW1F8L6 
ProdomW1F8L6 
UniProtKBE6NV35SubName: Full=Oxidoreductase Fe-S binding subunit;
InterProE6NV35 
PFAME6NV35 
ProdomE6NV35 
UniProtKBA0A070YL63SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KDX87738.1};
InterProA0A070YL63 
PFAMA0A070YL63 
ProdomA0A070YL63 
UniProtKBA0A071DI60SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KDZ40803.1};
InterProA0A071DI60 
PFAMA0A071DI60 
ProdomA0A071DI60 
UniProtKBA0A074HNT7SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KEN95906.1};
InterProA0A074HNT7 
PFAMA0A074HNT7 
ProdomA0A074HNT7 
UniProtKBA0A079FAR6SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KDY53289.1};
InterProA0A079FAR6 
PFAMA0A079FAR6 
ProdomA0A079FAR6 
UniProtKBA0A079FN41SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KDY61748.1};
InterProA0A079FN41 
PFAMA0A079FN41 
ProdomA0A079FN41 
UniProtKBA0A080GI62SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:KEN88533.1};
InterProA0A080GI62 
PFAMA0A080GI62 
ProdomA0A080GI62 
UniProtKBA0A090JAR5SubName: Full=Glutamate synthase, small subunit domain protein {ECO:0000313|EMBL:CEE07415.1};
InterProA0A090JAR5 
PFAMA0A090JAR5 
ProdomA0A090JAR5 
UniProtKBG0F5I3SubName: Full=Uncharacterized protein ygfT {ECO:0000313|EMBL:AEJ58214.1};
InterProG0F5I3 
PFAMG0F5I3 
ProdomG0F5I3 
UniProtKBD8AK98SubName: Full=Putative oxidoreductase Fe-S binding subunit {ECO:0000313|EMBL:EFK16423.1};
InterProD8AK98 
PFAMD8AK98 
ProdomD8AK98 
UniProtKBF4SPF4SubName: Full=Putative oxidoreductase, Fe-S subunit {ECO:0000313|EMBL:EGI09270.1};
InterProF4SPF4 
PFAMF4SPF4 
ProdomF4SPF4 
UniProtKBD8AXB6SubName: Full=Putative oxidoreductase Fe-S binding subunit {ECO:0000313|EMBL:EFJ68520.1};
InterProD8AXB6 
PFAMD8AXB6 
ProdomD8AXB6 
UniProtKBE1HHE0SubName: Full=Putative oxidoreductase Fe-S binding subunit {ECO:0000313|EMBL:EFK92670.1};
InterProE1HHE0 
PFAME1HHE0 
ProdomE1HHE0 
UniProtKBG2BDD0SubName: Full=Putative uncharacterized protein;
InterProG2BDD0 
PFAMG2BDD0 
ProdomG2BDD0 
UniProtKBK3HWA6SubName: Full=Uncharacterized protein;
InterProK3HWA6 
PFAMK3HWA6 
ProdomK3HWA6 
UniProtKBN2F2J6SubName: Full=Glutamate synthase, small subunit domain protein;
InterProN2F2J6 
PFAMN2F2J6 
ProdomN2F2J6 
UniProtKBK5GER6SubName: Full=Uncharacterized protein;
InterProK5GER6 
PFAMK5GER6 
ProdomK5GER6 
UniProtKBN2RFP3SubName: Full=Glutamate synthase, small subunit domain protein;
InterProN2RFP3 
PFAMN2RFP3 
ProdomN2RFP3 
UniProtKBI2YLS5SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProI2YLS5 
PFAMI2YLS5 
ProdomI2YLS5 
UniProtKBL8C643SubName: Full=Glutamate synthase [NADPH] small chain;EC=1.4.1.13;
InterProL8C643 
PFAML8C643 
ProdomL8C643 
UniProtKBK5GTI6SubName: Full=Glutamate synthase, small subunit domain protein;
InterProK5GTI6 
PFAMK5GTI6 
ProdomK5GTI6 
UniProtKBI2Y948SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProI2Y948 
PFAMI2Y948 
ProdomI2Y948 
UniProtKBW1B5E8SubName: Full=Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:CDK74820.1};EC=1.4.1.13 {ECO:0000313|EMBL:CDK74820.1};
InterProW1B5E8 
PFAMW1B5E8 
ProdomW1B5E8 
UniProtKBI2XBW6SubName: Full=Putative oxidoreductase Fe-S binding subunit {ECO:0000313|EMBL:EII46486.1};
InterProI2XBW6 
PFAMI2XBW6 
ProdomI2XBW6 
UniProtKBH4VKX5SubName: Full=Glutamate synthase, small subunit domain protein;
InterProH4VKX5 
PFAMH4VKX5 
ProdomH4VKX5 
UniProtKBE6NV35SubName: Full=Oxidoreductase Fe-S binding subunit;
InterProE6NV35 
PFAME6NV35 
ProdomE6NV35 
UniProtKBF4SPF4SubName: Full=Putative oxidoreductase, Fe-S subunit;
InterProF4SPF4 
PFAMF4SPF4 
ProdomF4SPF4 
UniProtKBG0F5I3SubName: Full=Uncharacterized protein ygfT;
InterProG0F5I3 
PFAMG0F5I3 
ProdomG0F5I3 
UniProtKBH4VKX5SubName: Full=Glutamate synthase, small subunit domain protein;
InterProH4VKX5 
PFAMH4VKX5 
ProdomH4VKX5 
UniProtKBI2YLS5SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProI2YLS5 
PFAMI2YLS5 
ProdomI2YLS5 
UniProtKBI2Y948SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProI2Y948 
PFAMI2Y948 
ProdomI2Y948 
UniProtKBI2XBW6SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProI2XBW6 
PFAMI2XBW6 
ProdomI2XBW6 
UniProtKBG2BDD0SubName: Full=Putative uncharacterized protein;
InterProG2BDD0 
PFAMG2BDD0 
ProdomG2BDD0 
UniProtKBE1HHE0SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProE1HHE0 
PFAME1HHE0 
ProdomE1HHE0 
UniProtKBD8AXB6SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProD8AXB6 
PFAMD8AXB6 
ProdomD8AXB6 
UniProtKBD8AK98SubName: Full=Putative oxidoreductase Fe-S binding subunit;
InterProD8AK98 
PFAMD8AK98 
ProdomD8AK98 
UniProtKBA0A1X3JDH2SubName: Full=Putative oxidoreductase, Fe-S subunit {ECO:0000313|EMBL:OSL05289.1}
InterProA0A1X3JDH2 
PFAMA0A1X3JDH2 
ProdomA0A1X3JDH2 
RefSeqZP_07243803.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1]
RefSeqZP_07166738.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1]
RefSeqZP_07161778.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1]
RefSeqZP_07498929.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli H736]
GenPept932860959Pyridine nucleotide-disulphide oxidoreductase family protein
GenPept16130789 (NC_000913) putative oxidoreductase, Fe-S subunit [Escherichia coli K12]
GenPept1789253putative oxidoreductase, Fe-S subunit; putative oxidoreductase: Fe-S subunit (N-terminal); nucleotide-binding domain (C-terminal
GenPept298545309unnamed protein product
GenPept300318736 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1]
GenPept301643765 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1]
GenPept300452803 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1]
GenPept300947606 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1]
GenPept300954275 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1]
GenPept301077864 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1]
GenPept307139573 putative oxidoreductase Fe-S binding subunit [Escherichia coli H736]
GenPept915281886Sequence 31892 from patent US 8952217
GenPept915242933Sequence 4388 from patent US 8952217
GenPept887837ORF_f644
GenPept802136231fused predicted oxidoreductase: Fe-S subunit/nucleotide-binding subunit
GenPept7451572G65072 hypothetical protein b2887 - Escherichia coli (strain K-12)
GenPept331037046putative oxidoreductase, Fe-S subunit
GenPept315137486oxidoreductase Fe-S binding subunit
GenBankAAA83068.1 ORF_f644 [Escherichia coli]
GenBankEFK92670.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 146-1]
GenBankEFK16423.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 116-1]
GenBankEFJ68520.1 putative oxidoreductase Fe-S binding subunit [Escherichia coli MS 175-1]