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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P64454.2
Original Database ID ref NP_415962.2
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation ydcx_ecol6 recname: full=uncharacterized
protein ydcx
Sequence Length 57

Dataset Information:

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Model Information

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Target Region1-57
Protein Length57
Template PDB Code3rkoN
Template Region72-129
Sequence Identity25%
E-Value0
GA3410.05
MPQS1.0036
z-DOPE1.95
TSVMod MethodMSALL
TSVMod RMSD10.264
TSVMod NO350.088
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3rko
DBALI3rkoN 
JenaImageLibrary3rko 
Target Sequence
UniProtKBL1X4M7SubName: Full=Inner membrane protein;
InterProL1X4M7 
PFAML1X4M7 
ProdomL1X4M7 
UniProtKBF9CHI0SubName: Full=Putative uncharacterized protein;
InterProF9CHI0 
PFAMF9CHI0 
ProdomF9CHI0 
UniProtKBG5THZ5SubName: Full=Putative uncharacterized protein;
InterProG5THZ5 
PFAMG5THZ5 
ProdomG5THZ5 
UniProtKBF8YFG0SubName: Full=Putative uncharacterized protein;
InterProF8YFG0 
PFAMF8YFG0 
ProdomF8YFG0 
UniProtKBC6UU30SubName: Full=Predicted inner membrane protein;
InterProC6UU30 
PFAMC6UU30 
ProdomC6UU30 
UniProtKBG5W5G0SubName: Full=Putative uncharacterized protein;
InterProG5W5G0 
PFAMG5W5G0 
ProdomG5W5G0 
UniProtKBG5VN56SubName: Full=Putative uncharacterized protein;
InterProG5VN56 
PFAMG5VN56 
ProdomG5VN56 
UniProtKBG5UR64SubName: Full=Putative uncharacterized protein;
InterProG5UR64 
PFAMG5UR64 
ProdomG5UR64 
UniProtKBH0QCP6SubName: Full=Predicted inner membrane protein;
InterProH0QCP6 
PFAMH0QCP6 
ProdomH0QCP6 
UniProtKBG5YG66SubName: Full=Putative uncharacterized protein;
InterProG5YG66 
PFAMG5YG66 
ProdomG5YG66 
UniProtKBH1ED50SubName: Full=Putative uncharacterized protein;
InterProH1ED50 
PFAMH1ED50 
ProdomH1ED50 
UniProtKBF9R2T4SubName: Full=Putative uncharacterized protein;
InterProF9R2T4 
PFAMF9R2T4 
ProdomF9R2T4 
UniProtKBC8TRH1SubName: Full=Predicted inner membrane protein {ECO:0000313|EMBL:BAI25321.1};
InterProC8TRH1 
PFAMC8TRH1 
ProdomC8TRH1 
UniProtKBC4ZWL9SubName: Full=Predicted inner membrane protein;
InterProC4ZWL9 
PFAMC4ZWL9 
ProdomC4ZWL9 
UniProtKBL1V8E4SubName: Full=Inner membrane protein;
InterProL1V8E4 
PFAML1V8E4 
ProdomL1V8E4 
UniProtKBL1Z2T5SubName: Full=Inner membrane protein;
InterProL1Z2T5 
PFAML1Z2T5 
ProdomL1Z2T5 
UniProtKBL1ZJD4SubName: Full=Inner membrane protein;
InterProL1ZJD4 
PFAML1ZJD4 
ProdomL1ZJD4 
UniProtKBL2AR69SubName: Full=Inner membrane protein;
InterProL2AR69 
PFAML2AR69 
ProdomL2AR69 
UniProtKBL1Y9Y3SubName: Full=Inner membrane protein;
InterProL1Y9Y3 
PFAML1Y9Y3 
ProdomL1Y9Y3 
UniProtKBL2CJ17SubName: Full=Inner membrane protein;
InterProL2CJ17 
PFAML2CJ17 
ProdomL2CJ17 
UniProtKBC5W3N3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29226.1};
InterProC5W3N3 
PFAMC5W3N3 
ProdomC5W3N3 
UniProtKBL2CQX4SubName: Full=Inner membrane protein;
InterProL2CQX4 
PFAML2CQX4 
ProdomL2CQX4 
UniProtKBB7URJ2SubName: Full=Predicted inner membrane protein {ECO:0000313|EMBL:CAS09134.1};
InterProB7URJ2 
PFAMB7URJ2 
ProdomB7URJ2 
UniProtKBL1Y415SubName: Full=Inner membrane protein;
InterProL1Y415 
PFAML1Y415 
ProdomL1Y415 
UniProtKBG5XWB2SubName: Full=Putative uncharacterized protein;
InterProG5XWB2 
PFAMG5XWB2 
ProdomG5XWB2 
UniProtKBG5U7M1SubName: Full=Putative uncharacterized protein;
InterProG5U7M1 
PFAMG5U7M1 
ProdomG5U7M1 
UniProtKBA0A0G2S906SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJM73626.1};
InterProA0A0G2S906 
PFAMA0A0G2S906 
ProdomA0A0G2S906 
UniProtKBA0A0G2XPJ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKI69493.1};
InterProA0A0G2XPJ0 
PFAMA0A0G2XPJ0 
ProdomA0A0G2XPJ0 
UniProtKBA0A0G3JC70SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK38863.1};
InterProA0A0G3JC70 
PFAMA0A0G3JC70 
ProdomA0A0G3JC70 
UniProtKBA0A0H3EV51SubName: Full=Predicted inner membrane protein {ECO:0000313|EMBL:ADT75050.1};
InterProA0A0H3EV51 
PFAMA0A0H3EV51 
ProdomA0A0H3EV51 
UniProtKBA0A0H9QUN7SubName: Full=Protein of uncharacterised function (DUF2566) {ECO:0000313|EMBL:CSL42170.1};
InterProA0A0H9QUN7 
PFAMA0A0H9QUN7 
ProdomA0A0H9QUN7 
UniProtKBK0BMR6SubName: Full=Uncharacterized protein;
InterProK0BMR6 
PFAMK0BMR6 
ProdomK0BMR6 
UniProtKBK3T0Z4SubName: Full=Uncharacterized protein;
InterProK3T0Z4 
PFAMK3T0Z4 
ProdomK3T0Z4 
UniProtKBK4V642SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EJE61179.1};
InterProK4V642 
PFAMK4V642 
ProdomK4V642 
UniProtKBK4VCV4SubName: Full=Uncharacterized protein;
InterProK4VCV4 
PFAMK4VCV4 
ProdomK4VCV4 
UniProtKBK4XKI0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EJE96038.1};
InterProK4XKI0 
PFAMK4XKI0 
ProdomK4XKI0 
UniProtKBA0A0E2L636SubName: Full=Inner membrane protein {ECO:0000313|EMBL:EQX28155.1};
InterProA0A0E2L636 
PFAMA0A0E2L636 
ProdomA0A0E2L636 
UniProtKBA0A0E1ZPE2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL30043.1};
InterProA0A0E1ZPE2 
PFAMA0A0E1ZPE2 
ProdomA0A0E1ZPE2 
UniProtKBA0A0E1LX70SubName: Full=Putative inner membrane protein {ECO:0000313|EMBL:AJF56282.1};
InterProA0A0E1LX70 
PFAMA0A0E1LX70 
ProdomA0A0E1LX70 
UniProtKBI2HZG5SubName: Full=Uncharacterized protein;
InterProI2HZG5 
PFAMI2HZG5 
ProdomI2HZG5 
UniProtKBI2P3L2SubName: Full=Uncharacterized protein;
InterProI2P3L2 
PFAMI2P3L2 
ProdomI2P3L2 
UniProtKBH6MG12SubName: Full=Uncharacterized protein;
InterProH6MG12 
PFAMH6MG12 
ProdomH6MG12 
UniProtKBI4PKE2SubName: Full=Uncharacterized protein;
InterProI4PKE2 
PFAMI4PKE2 
ProdomI4PKE2 
UniProtKBI4Q0V0SubName: Full=Uncharacterized protein;
InterProI4Q0V0 
PFAMI4Q0V0 
ProdomI4Q0V0 
UniProtKBI4NL98SubName: Full=Uncharacterized protein;
InterProI4NL98 
PFAMI4NL98 
ProdomI4NL98 
UniProtKBI5QI86SubName: Full=Uncharacterized protein;
InterProI5QI86 
PFAMI5QI86 
ProdomI5QI86 
UniProtKBA0A064TN91SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDG95705.1};
InterProA0A064TN91 
PFAMA0A064TN91 
ProdomA0A064TN91 
UniProtKBA0A094VRB6SubName: Full=Inner membrane protein {ECO:0000313|EMBL:CKI14750.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KIG79221.1};
InterProA0A094VRB6 
PFAMA0A094VRB6 
ProdomA0A094VRB6 
UniProtKBA0A0E0XZR7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS74540.1};
InterProA0A0E0XZR7 
PFAMA0A0E0XZR7 
ProdomA0A0E0XZR7 
UniProtKBK4Y4M2SubName: Full=Uncharacterized protein;
InterProK4Y4M2 
PFAMK4Y4M2 
ProdomK4Y4M2 
UniProtKBL1W1K8SubName: Full=Inner membrane protein;
InterProL1W1K8 
PFAML1W1K8 
ProdomL1W1K8 
UniProtKBC8UPP1SubName: Full=Predicted inner membrane protein {ECO:0000313|EMBL:BAI35741.1};
InterProC8UPP1 
PFAMC8UPP1 
ProdomC8UPP1 
UniProtKBL2ARV3SubName: Full=Inner membrane protein;
InterProL2ARV3 
PFAML2ARV3 
ProdomL2ARV3 
UniProtKBE0IVL8SubName: Full=Predicted inner membrane protein;
InterProE0IVL8 
PFAME0IVL8 
ProdomE0IVL8 
UniProtKBG5TX72SubName: Full=Putative uncharacterized protein;
InterProG5TX72 
PFAMG5TX72 
ProdomG5TX72 
UniProtKBG5XRD3SubName: Full=Putative uncharacterized protein;
InterProG5XRD3 
PFAMG5XRD3 
ProdomG5XRD3 
UniProtKBH1EI31SubName: Full=Putative uncharacterized protein;
InterProH1EI31 
PFAMH1EI31 
ProdomH1EI31 
UniProtKBI4NI34SubName: Full=Uncharacterized protein;
InterProI4NI34 
PFAMI4NI34 
ProdomI4NI34 
UniProtKBH4FHQ7SubName: Full=Uncharacterized protein;
InterProH4FHQ7 
PFAMH4FHQ7 
ProdomH4FHQ7 
UniProtKBI6EEX0SubName: Full=Putative membrane protein;
InterProI6EEX0 
PFAMI6EEX0 
ProdomI6EEX0 
UniProtKBH1FQH3SubName: Full=Putative uncharacterized protein;
InterProH1FQH3 
PFAMH1FQH3 
ProdomH1FQH3 
UniProtKBK8FK76SubName: Full=Uncharacterized protein;
InterProK8FK76 
PFAMK8FK76 
ProdomK8FK76 
UniProtKBL1XA39SubName: Full=Inner membrane protein;
InterProL1XA39 
PFAML1XA39 
ProdomL1XA39 
UniProtKBK4XFZ7SubName: Full=Uncharacterized protein;
InterProK4XFZ7 
PFAMK4XFZ7 
ProdomK4XFZ7 
UniProtKBC9QW20SubName: Full=Putative uncharacterized protein;
InterProC9QW20 
PFAMC9QW20 
ProdomC9QW20 
UniProtKBK4V566SubName: Full=Uncharacterized protein;
InterProK4V566 
PFAMK4V566 
ProdomK4V566 
UniProtKBC8U8C2SubName: Full=Predicted inner membrane protein {ECO:0000313|EMBL:BAI30400.1};
InterProC8U8C2 
PFAMC8U8C2 
ProdomC8U8C2 
UniProtKBH8D8M1SubName: Full=Uncharacterized protein;
InterProH8D8M1 
PFAMH8D8M1 
ProdomH8D8M1 
UniProtKBJ9ZMG2SubName: Full=Uncharacterized protein;
InterProJ9ZMG2 
PFAMJ9ZMG2 
ProdomJ9ZMG2 
UniProtKBL1YZT5SubName: Full=Inner membrane protein;
InterProL1YZT5 
PFAML1YZT5 
ProdomL1YZT5 
UniProtKBD8ABM4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK19442.1};
InterProD8ABM4 
PFAMD8ABM4 
ProdomD8ABM4 
UniProtKBG5X7E2SubName: Full=Putative uncharacterized protein;
InterProG5X7E2 
PFAMG5X7E2 
ProdomG5X7E2 
UniProtKBI4JAD7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86196.1};
InterProI4JAD7 
PFAMI4JAD7 
ProdomI4JAD7 
UniProtKBI5Y246SubName: Full=Uncharacterized protein;
InterProI5Y246 
PFAMI5Y246 
ProdomI5Y246 
UniProtKBL1W4Q2SubName: Full=Inner membrane protein;
InterProL1W4Q2 
PFAML1W4Q2 
ProdomL1W4Q2 
UniProtKBL1XR72SubName: Full=Inner membrane protein;
InterProL1XR72 
PFAML1XR72 
ProdomL1XR72 
UniProtKBI6EKZ2SubName: Full=Putative membrane protein;
InterProI6EKZ2 
PFAMI6EKZ2 
ProdomI6EKZ2 
UniProtKBI2R3J4SubName: Full=Uncharacterized protein;
InterProI2R3J4 
PFAMI2R3J4 
ProdomI2R3J4 
UniProtKBI4NM59SubName: Full=Uncharacterized protein;
InterProI4NM59 
PFAMI4NM59 
ProdomI4NM59 
UniProtKBI4SZD6SubName: Full=Uncharacterized protein;
InterProI4SZD6 
PFAMI4SZD6 
ProdomI4SZD6 
UniProtKBI4R6H6SubName: Full=Uncharacterized protein;
InterProI4R6H6 
PFAMI4R6H6 
ProdomI4R6H6 
UniProtKBI5RL64SubName: Full=Uncharacterized protein;
InterProI5RL64 
PFAMI5RL64 
ProdomI5RL64 
UniProtKBI4QVQ2SubName: Full=Uncharacterized protein;
InterProI4QVQ2 
PFAMI4QVQ2 
ProdomI4QVQ2 
UniProtKBC6EER8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29226.1};
InterProC6EER8 
PFAMC6EER8 
ProdomC6EER8 
UniProtKBK0AP90SubName: Full=Uncharacterized protein;
InterProK0AP90 
PFAMK0AP90 
ProdomK0AP90 
UniProtKBK4W7Z6SubName: Full=Uncharacterized protein;
InterProK4W7Z6 
PFAMK4W7Z6 
ProdomK4W7Z6 
UniProtKBJ2FJK6SubName: Full=Putative membrane protein {ECO:0000313|EMBL:EJL17010.1};
InterProJ2FJK6 
PFAMJ2FJK6 
ProdomJ2FJK6 
UniProtKBC6UHK3SubName: Full=Predicted inner membrane protein;
InterProC6UHK3 
PFAMC6UHK3 
ProdomC6UHK3 
UniProtKBH1DZC6SubName: Full=Putative uncharacterized protein;
InterProH1DZC6 
PFAMH1DZC6 
ProdomH1DZC6 
UniProtKBH1C677SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHP62721.1};
InterProH1C677 
PFAMH1C677 
ProdomH1C677 
UniProtKBL2AUG7SubName: Full=Inner membrane protein;
InterProL2AUG7 
PFAML2AUG7 
ProdomL2AUG7 
UniProtKBL2BIS6SubName: Full=Inner membrane protein;
InterProL2BIS6 
PFAML2BIS6 
ProdomL2BIS6 
UniProtKBB1XDF6SubName: Full=Predicted inner membrane protein;
InterProB1XDF6 
PFAMB1XDF6 
ProdomB1XDF6 
UniProtKBL2B833SubName: Full=Inner membrane protein;
InterProL2B833 
PFAML2B833 
ProdomL2B833 
UniProtKBD7Z888SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ83492.1};
InterProD7Z888 
PFAMD7Z888 
ProdomD7Z888 
UniProtKBG2F6U1SubName: Full=Putative uncharacterized protein;
InterProG2F6U1 
PFAMG2F6U1 
ProdomG2F6U1 
UniProtKBG5SXK9SubName: Full=Putative uncharacterized protein;
InterProG5SXK9 
PFAMG5SXK9 
ProdomG5SXK9 
UniProtKBG5W2V4SubName: Full=Putative uncharacterized protein;
InterProG5W2V4 
PFAMG5W2V4 
ProdomG5W2V4 
UniProtKBG5WSP1SubName: Full=Putative uncharacterized protein;
InterProG5WSP1 
PFAMG5WSP1 
ProdomG5WSP1 
UniProtKBL1WHI0SubName: Full=Inner membrane protein;
InterProL1WHI0 
PFAML1WHI0 
ProdomL1WHI0