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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P51692
Original Database ID EN GENSCAN00000015254
Organism Homo sapiens
Annotation recname: full=signal transducer
and activator of transcription
5b;
Sequence Length 787

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region2-684
Protein Length787
Template PDB Code1yvlA
Template Region2-682
Sequence Identity32%
E-Value0
GA3411
MPQS1.10765
z-DOPE-0.12
TSVMod MethodMSALL
TSVMod RMSD7.179
TSVMod NO350.71
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
PharmGKB   PharmGKB data available for STAT5B
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1yvlstructure of unphosphorylated stat1
DBALI1yvlA 
CATH1.10.532.10 Domain: 1yvlA01 Transcription Factor, Stat-4; (100%)
CATH1.20.1050.20 Domain: 1yvlA02 Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 (100%)
CATH2.60.40.630 Domain: 1yvlA03 Immunoglobulin-like (100%)
CATH1.10.238.10 Domain: 1yvlA04 EF-hand (100%)
CATH3.30.505.10 Domain: 1yvlA05 SHC Adaptor Protein (99%)
JenaImageLibrary1yvl 
Target Sequence
UniProtKBQ8WWS8RecName: Full=Signal transducer and activator of transcription 5B;
InterProQ8WWS8 
PFAMQ8WWS8 
ProdomQ8WWS8 
UniProtKBP51692RecName: Full=Signal transducer and activator of transcription 5B;
InterProP51692 
PFAMP51692 
ProdomP51692 
UniProtKBQ8WWS8Partial STAT5B signal transducer and activator of transcription 5B,DE exon 2 and joined CDS
InterProQ8WWS8 
PFAMQ8WWS8 
ProdomQ8WWS8 
UniProtKBP51692.2STA5B_HUMAN RecName: Full=Signal transducer and activator of transcription 5B
InterProP51692.2 
PFAMP51692.2 
ProdomP51692.2 
UniProtKBQ8WWS8RecName: Full=Signal transducer and activator of transcription 5B;
InterProQ8WWS8 
PFAMQ8WWS8 
ProdomQ8WWS8 
UniProtKBP51692RecName: Full=Signal transducer and activator of transcription 5B;
InterProP51692 
PFAMP51692 
ProdomP51692 
RefSeqNP_036580.2 signal transducer and activator of transcription 5B [Homo sapiens]
RefSeqXP_024306666.1signal transducer and activator of transcription 5B isoform X1
RefSeqXP_024306665.1signal transducer and activator of transcription 5B isoform X1
GenPept119581221signal transducer and activator of transcription 5B
GenPept48144324unnamed protein product
GenPept12740411 signal transducer and activator of transcription 5B [Homo sapiens]
GenPept915738188Sequence 950 from patent US 8999633
GenPept167773191signal transducer and activator of transcription 5B, partial
GenPept17975475unnamed protein product
GenPept21618344 signal transducer and activator of transcription 5B [Homo sapiens]
GenPept6981726transcription factor Stat5b
GenPept40807020Signal transducer and activator of transcription 5B
GenPept41019536STA5B_HUMAN RecName: Full=Signal transducer and activator of transcription 5B
GenBankAAC50485.2 transcription factor Stat5b [Homo sapiens]
GenBankEAW60817.1 signal transducer and activator of transcription 5B [Homo sapiens]
GenBankAAH65227.1 Signal transducer and activator of transcription 5B [Homo sapiens]
GenBankABZ92030.1 signal transducer and activator of transcription 5B [synthetic construct]
ENSEMBLENSP00000293328Signal transducer and activator of transcription 5B. [Homo sapiens]
EMBLCAD19638.1 
UCSCGenomeBrowserP51692 
ENSEMBLENSP00000293328 
ENSEMBLENSP00000293328TDI sequence
ENSEMBLGENSCAN00000009427 
ENSEMBLENSP00000293328