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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P24252.1
Original Database ID ref NP_415235.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation ybga_ecoli recname: full=uncharacterized
protein ybga; altname: full=orf169;
alt name: full=tkp
Sequence Length 169

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region59-144
Protein Length169
Template PDB Code3a7mA
Template Region24-107
Sequence Identity20%
E-Value0.64
GA3410.04
MPQS0.611676
z-DOPE0.73
TSVMod MethodMSALL
TSVMod RMSD14.157
TSVMod NO350.064
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3a7mstructure of flit, the flagellar type iii chaperone for flid
DBALI3a7mA 
JenaImageLibrary3a7m 
Target Sequence
UniProtKBE1HS91SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK89227.1};
InterProE1HS91 
PFAME1HS91 
ProdomE1HS91 
UniProtKBA0A0E1T3B6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU65834.1};
InterProA0A0E1T3B6 
PFAMA0A0E1T3B6 
ProdomA0A0E1T3B6 
UniProtKBA0A0E3H2H0SubName: Full=Uncharacterized protein YbgA {ECO:0000313|EMBL:AKA89651.1};
InterProA0A0E3H2H0 
PFAMA0A0E3H2H0 
ProdomA0A0E3H2H0 
UniProtKBA0A0H4RR36SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP83420.1};
InterProA0A0H4RR36 
PFAMA0A0H4RR36 
ProdomA0A0H4RR36 
UniProtKBF4M924SubName: Full=Putative uncharacterized protein;
InterProF4M924 
PFAMF4M924 
ProdomF4M924 
UniProtKBG2B6R2SubName: Full=Putative uncharacterized protein;
InterProG2B6R2 
PFAMG2B6R2 
ProdomG2B6R2 
UniProtKBG0FEZ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEJ55329.1};
InterProG0FEZ1 
PFAMG0FEZ1 
ProdomG0FEZ1 
UniProtKBF9QZB8SubName: Full=Putative uncharacterized protein;
InterProF9QZB8 
PFAMF9QZB8 
ProdomF9QZB8 
UniProtKBH4V018SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV61200.1};
InterProH4V018 
PFAMH4V018 
ProdomH4V018 
UniProtKBH4UGT8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV61929.1};
InterProH4UGT8 
PFAMH4UGT8 
ProdomH4UGT8 
UniProtKBH4W7C5SubName: Full=Uncharacterized protein;
InterProH4W7C5 
PFAMH4W7C5 
ProdomH4W7C5 
UniProtKBA0A0E0TV12SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55376.1};
InterProA0A0E0TV12 
PFAMA0A0E0TV12 
ProdomA0A0E0TV12 
UniProtKBA0A0A0FBF4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KGM59795.1};
InterProA0A0A0FBF4 
PFAMA0A0A0FBF4 
ProdomA0A0A0FBF4 
UniProtKBE9WQF0SubName: Full=Putative uncharacterized protein;
InterProE9WQF0 
PFAME9WQF0 
ProdomE9WQF0 
UniProtKBJ7RR71SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCK45863.1};
InterProJ7RR71 
PFAMJ7RR71 
ProdomJ7RR71 
UniProtKBK5GXE1SubName: Full=Uncharacterized protein;
InterProK5GXE1 
PFAMK5GXE1 
ProdomK5GXE1 
UniProtKBE3PH96SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBJ00226.1};
InterProE3PH96 
PFAME3PH96 
ProdomE3PH96 
UniProtKBE6BD49SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFU37591.1};
InterProE6BD49 
PFAME6BD49 
ProdomE6BD49 
UniProtKBK3JVE5SubName: Full=Uncharacterized protein;
InterProK3JVE5 
PFAMK3JVE5 
ProdomK3JVE5 
UniProtKBL2ZIA7SubName: Full=Uncharacterized protein;
InterProL2ZIA7 
PFAML2ZIA7 
ProdomL2ZIA7 
UniProtKBE7SJ54SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW50458.1};
InterProE7SJ54 
PFAME7SJ54 
ProdomE7SJ54 
UniProtKBL3F330SubName: Full=Uncharacterized protein;
InterProL3F330 
PFAML3F330 
ProdomL3F330 
UniProtKBL2V8B6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ELC11089.1};
InterProL2V8B6 
PFAML2V8B6 
ProdomL2V8B6 
UniProtKBI6EQB7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIQ46209.1};
InterProI6EQB7 
PFAMI6EQB7 
ProdomI6EQB7 
UniProtKBH0QDP6SubName: Full=Conserved protein;
InterProH0QDP6 
PFAMH0QDP6 
ProdomH0QDP6 
UniProtKBF4SKR9SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI10226.1};
InterProF4SKR9 
PFAMF4SKR9 
ProdomF4SKR9 
UniProtKBA0A069Z645SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU55120.1};
InterProA0A069Z645 
PFAMA0A069Z645 
ProdomA0A069Z645 
UniProtKBA0A070SYL4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX18898.1};
InterProA0A070SYL4 
PFAMA0A070SYL4 
ProdomA0A070SYL4 
UniProtKBA0A070U4Q2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX36409.1};
InterProA0A070U4Q2 
PFAMA0A070U4Q2 
ProdomA0A070U4Q2 
UniProtKBA0A070UK85SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX42661.1};
InterProA0A070UK85 
PFAMA0A070UK85 
ProdomA0A070UK85 
UniProtKBA0A070XYW5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX84482.1};
InterProA0A070XYW5 
PFAMA0A070XYW5 
ProdomA0A070XYW5 
UniProtKBA0A071AFJ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY57907.1};
InterProA0A071AFJ4 
PFAMA0A071AFJ4 
ProdomA0A071AFJ4 
UniProtKBA0A071C6R0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY86371.1};
InterProA0A071C6R0 
PFAMA0A071C6R0 
ProdomA0A071C6R0 
UniProtKBA0A071CAQ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ14975.1};
InterProA0A071CAQ2 
PFAMA0A071CAQ2 
ProdomA0A071CAQ2 
UniProtKBA0A073T730SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL21997.1};
InterProA0A073T730 
PFAMA0A073T730 
ProdomA0A073T730 
UniProtKBA0A074HNR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN97466.1};
InterProA0A074HNR3 
PFAMA0A074HNR3 
ProdomA0A074HNR3 
UniProtKBA0A069XEG7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU25848.1};
InterProA0A069XEG7 
PFAMA0A069XEG7 
ProdomA0A069XEG7 
UniProtKBI6C8C1SubName: Full=Uncharacterized protein;
InterProI6C8C1 
PFAMI6C8C1 
ProdomI6C8C1 
UniProtKBB2TU90SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACD07355.1};
InterProB2TU90 
PFAMB2TU90 
ProdomB2TU90 
UniProtKBH4XY80SubName: Full=Uncharacterized protein;
InterProH4XY80 
PFAMH4XY80 
ProdomH4XY80 
UniProtKBH4YF33SubName: Full=Uncharacterized protein;
InterProH4YF33 
PFAMH4YF33 
ProdomH4YF33 
UniProtKBH4X2K7SubName: Full=Uncharacterized protein;
InterProH4X2K7 
PFAMH4X2K7 
ProdomH4X2K7 
UniProtKBI2X7K1SubName: Full=PF08349 family protein {ECO:0000313|EMBL:EII44971.1};
InterProI2X7K1 
PFAMI2X7K1 
ProdomI2X7K1 
UniProtKBI2R5D3SubName: Full=Uncharacterized protein;
InterProI2R5D3 
PFAMI2R5D3 
ProdomI2R5D3 
UniProtKBI2ZWD0SubName: Full=PF08349 family protein;
InterProI2ZWD0 
PFAMI2ZWD0 
ProdomI2ZWD0 
UniProtKBI2PRN8SubName: Full=Uncharacterized protein;
InterProI2PRN8 
PFAMI2PRN8 
ProdomI2PRN8 
UniProtKBA7ZXW7SubName: Full=Putative uncharacterized protein;
InterProA7ZXW7 
PFAMA7ZXW7 
ProdomA7ZXW7 
UniProtKBI4SLX2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL51463.1};
InterProI4SLX2 
PFAMI4SLX2 
ProdomI4SLX2 
UniProtKBB1X6N8SubName: Full=Conserved protein;
InterProB1X6N8 
PFAMB1X6N8 
ProdomB1X6N8 
UniProtKBA0A074J710SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO14420.1};
InterProA0A074J710 
PFAMA0A074J710 
ProdomA0A074J710 
UniProtKBK0X9M8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EJZ68047.1};
InterProK0X9M8 
PFAMK0X9M8 
ProdomK0X9M8 
UniProtKBA0A079CZU8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY15324.1};
InterProA0A079CZU8 
PFAMA0A079CZU8 
ProdomA0A079CZU8 
UniProtKBE6BC64SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFU95293.1};
InterProE6BC64 
PFAME6BC64 
ProdomE6BC64 
UniProtKBA0A080GL22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN89919.1};
InterProA0A080GL22 
PFAMA0A080GL22 
ProdomA0A080GL22 
UniProtKBA0A0G2XBG0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKI65719.1};
InterProA0A0G2XBG0 
PFAMA0A0G2XBG0 
ProdomA0A0G2XBG0 
UniProtKBG2F7T1SubName: Full=Putative uncharacterized protein;
InterProG2F7T1 
PFAMG2F7T1 
ProdomG2F7T1 
UniProtKBH4WPV1SubName: Full=Uncharacterized protein;
InterProH4WPV1 
PFAMH4WPV1 
ProdomH4WPV1 
UniProtKBI2HZB5SubName: Full=Uncharacterized protein;
InterProI2HZB5 
PFAMI2HZB5 
ProdomI2HZB5 
UniProtKBI4JBJ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86599.1};
InterProI4JBJ0 
PFAMI4JBJ0 
ProdomI4JBJ0 
UniProtKBB2N7Q7SubName: Full=Putative uncharacterized protein;
InterProB2N7Q7 
PFAMB2N7Q7 
ProdomB2N7Q7 
UniProtKBI4NN14SubName: Full=Uncharacterized protein;
InterProI4NN14 
PFAMI4NN14 
ProdomI4NN14 
UniProtKBD7Y3K8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ97738.1};
InterProD7Y3K8 
PFAMD7Y3K8 
ProdomD7Y3K8 
UniProtKBD8C0F5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI87621.1};
InterProD8C0F5 
PFAMD8C0F5 
ProdomD8C0F5 
UniProtKBJ7QYN1SubName: Full=Protein YbgA {ECO:0000313|EMBL:AJE55018.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CCJ43162.1};
InterProJ7QYN1 
PFAMJ7QYN1 
ProdomJ7QYN1 
UniProtKBA0A079F6D5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY51483.1};
InterProA0A079F6D5 
PFAMA0A079F6D5 
ProdomA0A079F6D5 
UniProtKBC9R0R4SubName: Full=Uncharacterized protein;
InterProC9R0R4 
PFAMC9R0R4 
ProdomC9R0R4 
UniProtKBA0A079FM75SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY61291.1};
InterProA0A079FM75 
PFAMA0A079FM75 
ProdomA0A079FM75 
UniProtKBH4XIB3SubName: Full=Uncharacterized protein;
InterProH4XIB3 
PFAMH4XIB3 
ProdomH4XIB3 
UniProtKBD7XUZ9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ84803.1};
InterProD7XUZ9 
PFAMD7XUZ9 
ProdomD7XUZ9 
UniProtKBK5BZG6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EKJ81110.1};
InterProK5BZG6 
PFAMK5BZG6 
ProdomK5BZG6 
UniProtKBA0A079GQK4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY93338.1};
InterProA0A079GQK4 
PFAMA0A079GQK4 
ProdomA0A079GQK4 
UniProtKBG2CVN4SubName: Full=Putative uncharacterized protein;
InterProG2CVN4 
PFAMG2CVN4 
ProdomG2CVN4 
UniProtKBI0ZPH3SubName: Full=Uncharacterized protein;
InterProI0ZPH3 
PFAMI0ZPH3 
ProdomI0ZPH3 
UniProtKBI4THE2SubName: Full=Uncharacterized protein;
InterProI4THE2 
PFAMI4THE2 
ProdomI4THE2 
UniProtKBK3HFF4SubName: Full=Uncharacterized protein;
InterProK3HFF4 
PFAMK3HFF4 
ProdomK3HFF4 
UniProtKBK3IYC6SubName: Full=Uncharacterized protein;
InterProK3IYC6 
PFAMK3IYC6 
ProdomK3IYC6 
UniProtKBE1JA34SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK67264.1};
InterProE1JA34 
PFAME1JA34 
ProdomE1JA34 
UniProtKBH9UPW1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG39554.1};
InterProH9UPW1 
PFAMH9UPW1 
ProdomH9UPW1 
UniProtKBI2Y2Y4SubName: Full=PF08349 family protein;
InterProI2Y2Y4 
PFAMI2Y2Y4 
ProdomI2Y2Y4 
UniProtKBI2YRL3SubName: Full=PF08349 family protein;
InterProI2YRL3 
PFAMI2YRL3 
ProdomI2YRL3 
UniProtKBE9YE96SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB67211.1};
InterProE9YE96 
PFAME9YE96 
ProdomE9YE96 
UniProtKBI6D3S8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIQ26420.1};
InterProI6D3S8 
PFAMI6D3S8 
ProdomI6D3S8 
UniProtKBB3IPN6SubName: Full=Putative uncharacterized protein;
InterProB3IPN6 
PFAMB3IPN6 
ProdomB3IPN6 
UniProtKBC4ZWI2SubName: Full=Conserved protein;
InterProC4ZWI2 
PFAMC4ZWI2 
ProdomC4ZWI2 
UniProtKBI6G5G0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIQ63752.1};
InterProI6G5G0 
PFAMI6G5G0 
ProdomI6G5G0 
UniProtKBI6GEA1SubName: Full=Uncharacterized protein;
InterProI6GEA1 
PFAMI6GEA1 
ProdomI6GEA1 
UniProtKBD8AJ94SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK16820.1};
InterProD8AJ94 
PFAMD8AJ94 
ProdomD8AJ94 
UniProtKBF3VUQ5SubName: Full=Putative uncharacterized protein;
InterProF3VUQ5 
PFAMF3VUQ5 
ProdomF3VUQ5 
UniProtKBH4VTE7SubName: Full=Uncharacterized protein;
InterProH4VTE7 
PFAMH4VTE7 
ProdomH4VTE7 
UniProtKBH4VD18SubName: Full=Uncharacterized protein;
InterProH4VD18 
PFAMH4VD18 
ProdomH4VD18 
UniProtKBK5GZ49SubName: Full=Uncharacterized protein;
InterProK5GZ49 
PFAMK5GZ49 
ProdomK5GZ49 
UniProtKBE7IGR0SubName: Full=Putative uncharacterized protein;
InterProE7IGR0 
PFAME7IGR0 
ProdomE7IGR0 
UniProtKBE7THL3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW58519.1};
InterProE7THL3 
PFAME7THL3 
ProdomE7THL3 
UniProtKBE9WC67SubName: Full=Putative uncharacterized protein;
InterProE9WC67 
PFAME9WC67 
ProdomE9WC67 
UniProtKBA0A080IG74SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO27737.1};
InterProA0A080IG74 
PFAMA0A080IG74 
ProdomA0A080IG74 
UniProtKBA0A0E1LUL9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJF55436.1};
InterProA0A0E1LUL9 
PFAMA0A0E1LUL9 
ProdomA0A0E1LUL9 
UniProtKBA0A0H3X5N9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34273.1};
InterProA0A0H3X5N9 
PFAMA0A0H3X5N9 
ProdomA0A0H3X5N9 
UniProtKBG2ARF3SubName: Full=Putative uncharacterized protein;
InterProG2ARF3 
PFAMG2ARF3 
ProdomG2ARF3 
UniProtKBG2CIK1SubName: Full=Putative uncharacterized protein;
InterProG2CIK1 
PFAMG2CIK1 
ProdomG2CIK1 
UniProtKBD8B669SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ65409.1};
InterProD8B669 
PFAMD8B669 
ProdomD8B669