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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76066
Original Database ID UP P76066
Organism Escherichia coli, Escherichia coli K-12
Annotation recname: full=putative uncharacterized
protein ydaw;
Sequence Length 203

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-69
Protein Length203
Template PDB Code1q1hA
Template Region1-77
Sequence Identity29%
E-Value0.65
GA3411
MPQS0.652201
z-DOPE-0.29
TSVMod MethodMTALL
TSVMod RMSD6.791
TSVMod NO350.621
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1q1han extended winged helix domain in general transcription factor e/iie alpha
DBALI1q1hA 
CATH1.10.10.10 Domain: 1q1hA00 "winged helix" repressor DNA binding domain (87%)
JenaImageLibrary1q1h 
Target Sequence
UniProtKBQ2MBE1RecName: Full=Putative uncharacterized protein YdaW;
InterProQ2MBE1 
PFAMQ2MBE1 
ProdomQ2MBE1 
UniProtKBP76066RecName: Full=Putative uncharacterized protein YdaW;
InterProP76066 
PFAMP76066 
ProdomP76066 
UniProtKBQ2MBE1RecName: Full=Putative uncharacterized protein YdaW;
InterProQ2MBE1 
PFAMQ2MBE1 
ProdomQ2MBE1 
UniProtKBP76066.1YDAW_ECOLI RecName: Full=Putative uncharacterized protein ydaW
InterProP76066.1 
PFAMP76066.1 
ProdomP76066.1 
UniProtKBP76066RecName: Full=Putative uncharacterized protein YdaW;
InterProP76066 
PFAMP76066 
ProdomP76066 
GenPept7451985D64886 membrane protein ydaW - Escherichia coli
GenPept63089107unnamed protein product
GenPept33757458Sequence 436 from patent US 6589738
GenPept3025105YDAW_ECOLI RecName: Full=Putative uncharacterized protein ydaW
GenPept1787624orf, hypothetical protein; Rac prophage; putative transcriptional regulator
GenPept16129322 (NC_000913) orf, hypothetical protein [Escherichia coli K12]