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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76168.2
Original Database ID UP P76168
Organism Escherichia coli, Escherichia coli K-12
Annotation intq_ecoli recname: full=putative
lambdoid prophage qin defective
integrase
Sequence Length 385

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region154-369
Protein Length385
Template PDB Code3nkhA
Template Region-3-217
Sequence Identity16%
E-Value0
GA3410.95
MPQS0.505539
z-DOPE-0.07
TSVMod MethodMSALL
TSVMod RMSD5.95
TSVMod NO350.533
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3nkhcrystal structure of integrase from mrsa strain staphylococcus aureus
DBALI3nkhA 
JenaImageLibrary3nkh 
Target Sequence
UniProtKBP76168RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProP76168 
PFAMP76168 
ProdomP76168 
UniProtKBQ2MB81RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProQ2MB81 
PFAMQ2MB81 
ProdomQ2MB81 
UniProtKBP76168RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProP76168 
PFAMP76168 
ProdomP76168 
UniProtKBP76168.2INTQ_ECOLI RecName: Full=Putative lambdoid prophage Qin defective integrase
InterProP76168.2 
PFAMP76168.2 
ProdomP76168.2 
UniProtKBQ2MB81RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProQ2MB81 
PFAMQ2MB81 
ProdomQ2MB81 
GenPept
GenPept9910723INTQ_ECOLI RecName: Full=Putative lambdoid prophage Qin defective integrase