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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q46840.2
Original Database ID UP Q46840
Organism Escherichia coli, Escherichia coli K-12
Annotation ygho_ecoli recname: full=putative
uncharacterized protein ygho
Sequence Length 366

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region71-142
Protein Length366
Template PDB Code1pcaA
Template Region88-168
Sequence Identity33%
E-Value0.3
GA3410.11
MPQS0.211321
z-DOPE1.39
TSVMod MethodMSALL
TSVMod RMSD13.222
TSVMod NO350.05
DatasetMW-update_I19
ModPipe VersionSVN.r1278
Model Date2010-08-05

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1pcathree dimensional structure of porcine pancreatic procarboxypeptidase a. a comparison of the a and b zymogens and their determinants for inhibition and activation ; EC: 3.4.17.1 ; PFAM: PF00246 PF02244
DBALI1pcaA 
JenaImageLibrary1pca 
Target Sequence
UniProtKBQ2M9L4RecName: Full=Putative uncharacterized protein YghO;Flags: Fragment;
InterProQ2M9L4 
PFAMQ2M9L4 
ProdomQ2M9L4 
UniProtKBQ46840RecName: Full=Putative uncharacterized protein YghO;Flags: Fragment;
InterProQ46840 
PFAMQ46840 
ProdomQ46840 
UniProtKBQ2M9L4RecName: Full=Putative uncharacterized protein YghO;Flags: Fragment;
InterProQ2M9L4 
PFAMQ2M9L4 
ProdomQ2M9L4 
UniProtKBQ46840RecName: Full=Putative uncharacterized protein YghO;Flags: Fragment;
InterProQ46840 
PFAMQ46840 
ProdomQ46840 
UniProtKBQ46840.2YGHO_ECOLI RecName: Full=Putative uncharacterized protein yghO
InterProQ46840.2 
PFAMQ46840.2 
ProdomQ46840.2 
RefSeqWP_024210304.1hypothetical protein, partial
GenPept14195558YGHO_ECOLI RecName: Full=Putative uncharacterized protein yghO