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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P38432
Original Database ID EN ENSP00000240316.4
Organism Homo sapiens, synthetic construct
Annotation recname: full=coilin;altname:
full=p80-coilin;
Sequence Length 576

Dataset Information:

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Model Information

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Target Region103-214
Protein Length576
Template PDB Code1up6E
Template Region262-403
Sequence Identity21%
E-Value0.081
GA3410.08
MPQS0.236544
z-DOPE0.16
TSVMod MethodMSALL
TSVMod RMSD10.81
TSVMod NO350.135
Datasethuman_2010_A1
ModPipe VersionSVN.r1188:1193
Model Date2010-11-02

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1up6structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.55 anstrom resolution in the tetragonal form with manganese, nad+ and glucose-6-phosphate
DBALI1up6E 
JenaImageLibrary1up6 
Target Sequence
UniProtKBP38432RecName: Full=Coilin;AltName: Full=p80;
InterProP38432 
PFAMP38432 
ProdomP38432 
UniProtKBB2R931RecName: Full=Coilin;AltName: Full=p80;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
UniProtKBB2R931SubName: Full=Coilin;SubName: Full=cDNA, FLJ94186, Homo sapiens coilin (COIL), mRNA;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
UniProtKBP38432.1P80C_HUMAN RecName: Full=Coilin; AltName: Full=p80
InterProP38432.1 
PFAMP38432.1 
ProdomP38432.1 
UniProtKBP38432RecName: Full=Coilin;AltName: Full=p80-coilin;
InterProP38432 
PFAMP38432 
ProdomP38432 
UniProtKBB2R931RecName: Full=Coilin;AltName: Full=p80-coilin;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
RefSeqNP_004636.1 coilin [Homo sapiens]
GenPept1082676S50113 coilin, p80 - human
GenPept585632P80C_HUMAN RecName: Full=Coilin; AltName: Full=p80
GenPept568534497Sequence 22122 from patent US 8586006
GenPept4758024 coilin [Homo sapiens]
GenPept119614928coilin
GenPept123988675coilin
GenPept123999190coilin, partial
GenPept14714509Coilin
GenPept14769708 hypothetical protein XP_042176 [Homo sapiens]
GenPept189069346unnamed protein product
GenPept458436p80-coilin
GenBankABM87175.1 coilin [synthetic construct]
GenBankEAW94522.1 coilin [Homo sapiens]
GenBankABM83853.1 coilin [synthetic construct]
GenBankAAB81550.1 p80-coilin [Homo sapiens]
GenBankAAH10385.1 Coilin [Homo sapiens]
ENSEMBLENSP00000240316Coilin (p80). [Homo sapiens]
ENSEMBLENSP00000240316 
ENSEMBLENSP00000240316TDI sequence
ENSEMBLENSP00000240316 
UCSCGenomeBrowserP38432