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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P38432
Original Database ID EN ENSP00000240316.4
Organism Homo sapiens, synthetic construct
Annotation recname: full=coilin;altname:
full=p80-coilin;
Sequence Length 576

Dataset Information:

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Model Information

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Target Region94-355
Protein Length576
Template PDB Code1gteA
Template Region2-213
Sequence Identity18%
E-Value 0
GA3410.01
MPQS-0.11
z-DOPE1.52
TSVMod MethodNO3.5T
TSVMod RMSD
TSVMod NO350.0187793
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1gtedihydropyrimidine dehydrogenase (dpd) from pig, binary complex with 5-iodouracil ; EC: 1.3.1.2 ; PFAM: PF00037 PF00070 PF01180 ; SCOP: 70440 70441 70442 70443 70444
DBALI1gteA 
CATH1.10.1060.10 Domain: 1gteA02 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 (100%)
JenaImageLibrary1gte 
Target Sequence
UniProtKBP38432RecName: Full=Coilin;AltName: Full=p80;
InterProP38432 
PFAMP38432 
ProdomP38432 
UniProtKBB2R931RecName: Full=Coilin;AltName: Full=p80;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
UniProtKBB2R931SubName: Full=Coilin;SubName: Full=cDNA, FLJ94186, Homo sapiens coilin (COIL), mRNA;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
UniProtKBP38432.1P80C_HUMAN RecName: Full=Coilin; AltName: Full=p80
InterProP38432.1 
PFAMP38432.1 
ProdomP38432.1 
UniProtKBP38432RecName: Full=Coilin;AltName: Full=p80-coilin;
InterProP38432 
PFAMP38432 
ProdomP38432 
UniProtKBB2R931RecName: Full=Coilin;AltName: Full=p80-coilin;
InterProB2R931 
PFAMB2R931 
ProdomB2R931 
RefSeqNP_004636.1 coilin [Homo sapiens]
GenPept1082676S50113 coilin, p80 - human
GenPept585632P80C_HUMAN RecName: Full=Coilin; AltName: Full=p80
GenPept568534497Sequence 22122 from patent US 8586006
GenPept4758024 coilin [Homo sapiens]
GenPept119614928coilin
GenPept123988675coilin
GenPept123999190coilin, partial
GenPept14714509Coilin
GenPept14769708 hypothetical protein XP_042176 [Homo sapiens]
GenPept189069346unnamed protein product
GenPept458436p80-coilin
GenBankABM87175.1 coilin [synthetic construct]
GenBankEAW94522.1 coilin [Homo sapiens]
GenBankABM83853.1 coilin [synthetic construct]
GenBankAAB81550.1 p80-coilin [Homo sapiens]
GenBankAAH10385.1 Coilin [Homo sapiens]
ENSEMBLENSP00000240316Coilin (p80). [Homo sapiens]
ENSEMBLENSP00000240316 
ENSEMBLENSP00000240316TDI sequence
ENSEMBLENSP00000240316 
UCSCGenomeBrowserP38432