University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link B2R9H4
Original Database ID EN ENSP00000285419.3
Organism Gorilla gorilla gorilla, Pan troglodytes, etc.
Annotation subname: full=transmembrane protein
55a, isoform cra_a;subname: full=cdna,
flj94 392;
Sequence Length 257

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region10-244
Protein Length257
Template PDB Code1gteA
Template Region2-222
Sequence Identity14%
E-Value 0
GA3410.03
MPQS0.41
z-DOPE2.42
TSVMod MethodNO3.5T
TSVMod RMSD
TSVMod NO350.0224215
Datasethuman_2008
ModPipe Version2.0.2
Model Date2008-11-05

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1gtedihydropyrimidine dehydrogenase (dpd) from pig, binary complex with 5-iodouracil ; EC: 1.3.1.2 ; PFAM: PF00037 PF00070 PF01180 ; SCOP: 70440 70441 70442 70443 70444
DBALI1gteA 
CATH1.10.1060.10 Domain: 1gteA02 Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 (100%)
JenaImageLibrary1gte 
Target Sequence
UniProtKBB2R9H4RecName: Full=Transmembrane protein 55A;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase;
InterProB2R9H4 
PFAMB2R9H4 
ProdomB2R9H4 
UniProtKBG3RLV6SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSGGOP00000016767};
InterProG3RLV6 
PFAMG3RLV6 
ProdomG3RLV6 
UniProtKBQ8N4L2RecName: Full=Transmembrane protein 55A;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase;
InterProQ8N4L2 
PFAMQ8N4L2 
ProdomQ8N4L2 
UniProtKBQ68CU2RecName: Full=Transmembrane protein 55A;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase;
InterProQ68CU2 
PFAMQ68CU2 
ProdomQ68CU2 
UniProtKBH2QWF1SubName: Full=Transmembrane protein 55A {ECO:0000313|EMBL:JAA04101.1};SubName: Full=Uncharacterized protein {ECO:0000313|Ensembl:ENSPTRP00000034913};
InterProH2QWF1 
PFAMH2QWF1 
ProdomH2QWF1 
UniProtKBB2R9H4SubName: Full=Transmembrane protein 55A, isoform CRA_a;SubName: Full=cDNA, FLJ94392;
InterProB2R9H4 
PFAMB2R9H4 
ProdomB2R9H4 
UniProtKBA0A6D2WCQ1Phosphatidylinositol-4,5-bisphosphate 4-phosphatase {ECO:0000256|ARBA:ARBA00012936, ECO:0000256|RuleBase:RU365008}EC=3.1.3.78 {ECO:0000256|ARBA:ARBA00012936, ECO:0000256|RuleBase:RU365008}
InterProA0A6D2WCQ1 
PFAMA0A6D2WCQ1 
ProdomA0A6D2WCQ1 
UniProtKBA0A2J8PLM6Phosphatidylinositol-4,5-bisphosphate 4-phosphatase {ECO:0000256|ARBA:ARBA00012936, ECO:0000256|RuleBase:RU365008}EC=3.1.3.78 {ECO:0000256|ARBA:ARBA00012936, ECO:0000256|RuleBase:RU365008}
InterProA0A2J8PLM6 
PFAMA0A2J8PLM6 
ProdomA0A2J8PLM6 
UniProtKBH2QWF1SubName: Full=Uncharacterized protein;
InterProH2QWF1 
PFAMH2QWF1 
ProdomH2QWF1 
UniProtKBG3RLV6SubName: Full=Uncharacterized protein;
InterProG3RLV6 
PFAMG3RLV6 
ProdomG3RLV6 
UniProtKBQ8N4L2Hypothetical protein TMEM55A
InterProQ8N4L2 
PFAMQ8N4L2 
ProdomQ8N4L2 
UniProtKBQ68CU2RecName: Full=Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase;Short=Type 2 PtdIns-4,5-P2 4-Ptase;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Transmembrane protein 55A;
InterProQ68CU2 
PFAMQ68CU2 
ProdomQ68CU2 
UniProtKBQ8N4L2RecName: Full=Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase;Short=Type 2 PtdIns-4,5-P2 4-Ptase;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Transmembrane protein 55A;
InterProQ8N4L2 
PFAMQ8N4L2 
ProdomQ8N4L2 
UniProtKBQ8N4L2.1TM55A_HUMAN RecName: Full=Transmembrane protein 55A; AltName: Full=PtdIns-4,5-P2 4-Ptase II; AltName: Full=Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase
InterProQ8N4L2.1 
PFAMQ8N4L2.1 
ProdomQ8N4L2.1 
UniProtKBB2R9H4RecName: Full=Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase;Short=Type 2 PtdIns-4,5-P2 4-Ptase;EC=3.1.3.78;AltName: Full=PtdIns-4,5-P2 4-Ptase II;AltName: Full=Transmembrane protein 55A;
InterProB2R9H4 
PFAMB2R9H4 
ProdomB2R9H4 
RefSeqXP_034822222.1type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase
RefSeqNP_061180.1 transmembrane protein 55A [Homo sapiens]
RefSeqXP_519854.1 PREDICTED: transmembrane protein 55A isoform 2 [Pan troglodytes]
GenPept119612078transmembrane protein 55A, isoform CRA_a
GenPept17450173 (XM_056754) hypothetical protein DKFZp762O076 [Homo sapiens]
GenPept189054014unnamed protein product
GenPept21706677Transmembrane protein 55A
GenPept24308165 transmembrane protein 55A [Homo sapiens]
GenPept312150646transmembrane protein 55A, partial
GenPept32693680unnamed protein product
GenPept55630962 PREDICTED: transmembrane protein 55A isoform 2 [Pan troglodytes]
GenPept649109968TMEM55A, partial
GenPept74728868TM55A_HUMAN RecName: Full=Transmembrane protein 55A; AltName: Full=PtdIns-4,5-P2 4-Ptase II; AltName: Full=Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase
GenPept756901113Sequence 105 from patent US 8852861
GenBankAAH33892.1 Transmembrane protein 55A [Homo sapiens]
GenBankEAW91672.1 transmembrane protein 55A, isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000285419Ensembl Family: UNKNOWN [Homo sapiens]
UCSCGenomeBrowserQ8N4L2 
UCSCGenomeBrowserENSPTRT00000037774.1 
ENSEMBLENSP00000285419 
ENSEMBLENSPTRP00000034913 
ENSEMBLENSP00000285419TDI sequence
ENSEMBLENSP00000285419